Gene
RNA
| Item | Value |
|---|---|
| gene id | G201349 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 90014776 ~ 90015047 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU227916 | True | 206 | lncRNA | 0.40 | 2 | 90014776 | 90015047 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499430 | LOC106561547 | coding | upstream | 85275 | 89924291 ~ 89929501 (+) |
| LOC110499418 | LOC106561545 | coding | upstream | 120357 | 89883357 ~ 89894419 (+) |
| LOC110499409 | LOC100380677 | coding | upstream | 131531 | 89830922 ~ 89883245 (+) |
| LOC110499385 | LOC106561542 | coding | upstream | 221677 | 89772599 ~ 89793099 (+) |
| LOC110499364 | LOC106561540 | coding | upstream | 274558 | 89728940 ~ 89740218 (+) |
| asz1 | LOC106561550 | coding | downstream | 115493 | 90130540 ~ 90170115 (+) |
| wnt2 | LOC106561551 | coding | downstream | 168234 | 90183281 ~ 90196936 (+) |
| cpa5 | cbpa1 | coding | downstream | 562873 | 90577920 ~ 90594338 (+) |
| LOC110499537 | LOC106561558 | coding | downstream | 579403 | 90594450 ~ 90599294 (+) |
| poc1b | poc1b | coding | downstream | 592043 | 90607090 ~ 90667412 (+) |
| G201345 | NA | non-coding | upstream | 5872 | 90008517 ~ 90008904 (+) |
| G201322 | NA | non-coding | upstream | 54905 | 89958385 ~ 89959871 (+) |
| G201287 | NA | non-coding | upstream | 104493 | 89910081 ~ 89910283 (+) |
| G201275 | NA | non-coding | upstream | 107585 | 89906770 ~ 89907191 (+) |
| G201268 | NA | non-coding | upstream | 115455 | 89899102 ~ 89899321 (+) |
| G201279 | NA | non-coding | downstream | 19906 | 90034953 ~ 90035952 (+) |
| G201379 | LOC100136366 | non-coding | downstream | 54243 | 90069290 ~ 90070243 (+) |
| G201848 | NA | non-coding | downstream | 115721 | 90130768 ~ 90130971 (+) |
| G201851 | NA | non-coding | downstream | 121094 | 90136141 ~ 90136370 (+) |
| G201888 | NA | non-coding | downstream | 169574 | 90184621 ~ 90184836 (+) |
| LOC110499234 | rbl2 | other | upstream | 592338 | 89395057 ~ 89422438 (+) |
| G199223 | hipk3 | other | upstream | 2146809 | 87866877 ~ 87867967 (+) |
| G198811 | LOC106561481 | other | upstream | 2477848 | 87535936 ~ 87536928 (+) |
| G198784 | NA | other | upstream | 2518041 | 87493623 ~ 87496735 (+) |
| G198575 | NA | other | upstream | 2864286 | 87150202 ~ 87150490 (+) |
| G202039 | NA | other | downstream | 432071 | 90447118 ~ 90447573 (+) |
| G202185 | NA | other | downstream | 701895 | 90716942 ~ 90717421 (+) |
| LOC110499641 | LOC106561583 | other | downstream | 1221978 | 91235465 ~ 91239737 (+) |
| mgat4c | LOC106561589 | other | downstream | 1351290 | 91366282 ~ 91543765 (+) |
| G203414 | NA | other | downstream | 1606954 | 91622001 ~ 91624293 (+) |
