G201848


Basic Information

Item Value
gene id G201848
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 90130768 ~ 90130971 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU228506
ACACACTGTCTGCGGGGTCTCTAGTTGCTCAATTGAGCGGGCTCCGAGCTGGGGTAGGACGTTTCACCTCTCAGGCCCTCGGCCTGTGCCGTGAGAGGGCAGAGTTAAACGTTTGAGAGAGTGGTGAATATACTGCTACAAAGGCAAACTTTTGCTTCGCAAGTCCCAACTTTACATATTCGTTATACTTCTTCTTATTCCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228506 True 204 lncRNA 0.43 1 90130768 90130971

Neighbor

gene id symbol gene type direction distance location
LOC110502295 LOC106561548 coding upstream 86944 89937146 ~ 90043824 (+)
LOC110499430 LOC106561547 coding upstream 201267 89924291 ~ 89929501 (+)
LOC110499418 LOC106561545 coding upstream 236349 89883357 ~ 89894419 (+)
LOC110499409 LOC100380677 coding upstream 247523 89830922 ~ 89883245 (+)
LOC110499385 LOC106561542 coding upstream 337669 89772599 ~ 89793099 (+)
wnt2 LOC106561551 coding downstream 52310 90183281 ~ 90196936 (+)
cpa5 cbpa1 coding downstream 446949 90577920 ~ 90594338 (+)
LOC110499537 LOC106561558 coding downstream 463479 90594450 ~ 90599294 (+)
poc1b poc1b coding downstream 476119 90607090 ~ 90667412 (+)
dusp6 dus6 coding downstream 570442 90701413 ~ 90706025 (+)
G201379 LOC100136366 non-coding upstream 60525 90069290 ~ 90070243 (+)
G201279 NA non-coding upstream 94816 90034953 ~ 90035952 (+)
G201349 NA non-coding upstream 115721 90014776 ~ 90015047 (+)
G201345 NA non-coding upstream 121864 90008517 ~ 90008904 (+)
G201322 NA non-coding upstream 170897 89958385 ~ 89959871 (+)
G201851 NA non-coding downstream 5170 90136141 ~ 90136370 (+)
G201888 NA non-coding downstream 53650 90184621 ~ 90184836 (+)
G201892 NA non-coding downstream 57784 90188755 ~ 90188962 (+)
G201893 NA non-coding downstream 58111 90189082 ~ 90189469 (+)
G201895 NA non-coding downstream 62504 90193475 ~ 90193794 (+)
LOC110499234 rbl2 other upstream 708330 89395057 ~ 89422438 (+)
G199223 hipk3 other upstream 2262801 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 2593840 87535936 ~ 87536928 (+)
G198784 NA other upstream 2634033 87493623 ~ 87496735 (+)
G198575 NA other upstream 2980278 87150202 ~ 87150490 (+)
G202039 NA other downstream 316147 90447118 ~ 90447573 (+)
G202185 NA other downstream 585971 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 1106054 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 1235366 91366282 ~ 91543765 (+)
G203414 NA other downstream 1491030 91622001 ~ 91624293 (+)

Expression


Co-expression Network