Item | Value |
---|---|
gene id | G201892 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 90188755 ~ 90188962 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU228553 | True | 208 | lncRNA | 0.39 | 1 | 90188755 | 90188962 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
asz1 | LOC106561550 | coding | upstream | 18640 | 90130540 ~ 90170115 (+) |
LOC110502295 | LOC106561548 | coding | upstream | 144931 | 89937146 ~ 90043824 (+) |
LOC110499430 | LOC106561547 | coding | upstream | 259254 | 89924291 ~ 89929501 (+) |
LOC110499418 | LOC106561545 | coding | upstream | 294336 | 89883357 ~ 89894419 (+) |
LOC110499409 | LOC100380677 | coding | upstream | 305510 | 89830922 ~ 89883245 (+) |
cpa5 | cbpa1 | coding | downstream | 388958 | 90577920 ~ 90594338 (+) |
LOC110499537 | LOC106561558 | coding | downstream | 405488 | 90594450 ~ 90599294 (+) |
poc1b | poc1b | coding | downstream | 418128 | 90607090 ~ 90667412 (+) |
dusp6 | dus6 | coding | downstream | 512451 | 90701413 ~ 90706025 (+) |
si:dkey-106n21.1 | LOC106561561 | coding | downstream | 604286 | 90793248 ~ 90868325 (+) |
G201888 | NA | non-coding | upstream | 3919 | 90184621 ~ 90184836 (+) |
G201851 | NA | non-coding | upstream | 52385 | 90136141 ~ 90136370 (+) |
G201848 | NA | non-coding | upstream | 57784 | 90130768 ~ 90130971 (+) |
G201379 | LOC100136366 | non-coding | upstream | 118512 | 90069290 ~ 90070243 (+) |
G201279 | NA | non-coding | upstream | 152803 | 90034953 ~ 90035952 (+) |
G201893 | NA | non-coding | downstream | 120 | 90189082 ~ 90189469 (+) |
G201895 | NA | non-coding | downstream | 4513 | 90193475 ~ 90193794 (+) |
G201896 | NA | non-coding | downstream | 5548 | 90194510 ~ 90194758 (+) |
G201886 | NA | non-coding | downstream | 13917 | 90202879 ~ 90206418 (+) |
G201898 | NA | non-coding | downstream | 19299 | 90208261 ~ 90211007 (+) |
LOC110499234 | rbl2 | other | upstream | 766317 | 89395057 ~ 89422438 (+) |
G199223 | hipk3 | other | upstream | 2320788 | 87866877 ~ 87867967 (+) |
G198811 | LOC106561481 | other | upstream | 2651827 | 87535936 ~ 87536928 (+) |
G198784 | NA | other | upstream | 2692020 | 87493623 ~ 87496735 (+) |
G198575 | NA | other | upstream | 3038265 | 87150202 ~ 87150490 (+) |
G202039 | NA | other | downstream | 258156 | 90447118 ~ 90447573 (+) |
G202185 | NA | other | downstream | 527980 | 90716942 ~ 90717421 (+) |
LOC110499641 | LOC106561583 | other | downstream | 1048063 | 91235465 ~ 91239737 (+) |
mgat4c | LOC106561589 | other | downstream | 1177375 | 91366282 ~ 91543765 (+) |
G203414 | NA | other | downstream | 1433039 | 91622001 ~ 91624293 (+) |