Gene
RNA
| Item | Value |
|---|---|
| gene id | G202239 |
| gene name | LOC106561551 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 90190857 ~ 90191116 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein Wnt-2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU228936 | True | 260 | lncRNA | 0.62 | 1 | 90190857 | 90191116 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499460 | LOC100136366 | coding | downstream | 65854 | 90044696 ~ 90125003 (-) |
| LOC110499439 | LOC106561546 | coding | downstream | 268137 | 89901507 ~ 89922720 (-) |
| LOC110499401 | lgr5 | coding | downstream | 370003 | 89793119 ~ 89820854 (-) |
| LOC110499378 | LOC106561541 | coding | downstream | 427485 | 89751743 ~ 89763372 (-) |
| tph2 | tph2 | coding | downstream | 442712 | 89740189 ~ 89748145 (-) |
| LOC110502310 | st7 | coding | upstream | 6115 | 90197231 ~ 90298528 (-) |
| LOC110499482 | LOC100380720 | coding | upstream | 109430 | 90300546 ~ 90321779 (-) |
| met | LOC106561553 | coding | upstream | 147027 | 90338143 ~ 90427147 (-) |
| cav1 | LOC106561554 | coding | upstream | 262580 | 90453696 ~ 90463528 (-) |
| cav2 | LOC106561555 | coding | upstream | 273570 | 90464686 ~ 90470189 (-) |
| G202233 | LOC106561551 | non-coding | downstream | 6316 | 90184321 ~ 90184541 (-) |
| G202227 | NA | non-coding | downstream | 12344 | 90178284 ~ 90178513 (-) |
| G201804 | NA | non-coding | downstream | 135792 | 90023044 ~ 90055065 (-) |
| G201735 | NA | non-coding | downstream | 290922 | 89899650 ~ 89899935 (-) |
| G202240 | NA | non-coding | upstream | 2220 | 90193336 ~ 90193617 (-) |
| G202247 | NA | non-coding | upstream | 46452 | 90237568 ~ 90241681 (-) |
| G202282 | NA | non-coding | upstream | 139112 | 90330228 ~ 90365579 (-) |
| G202301 | NA | non-coding | upstream | 175500 | 90366616 ~ 90368419 (-) |
| G202304 | NA | non-coding | upstream | 179158 | 90370274 ~ 90407811 (-) |
| LOC110499346 | vps4a | other | downstream | 580967 | 89606837 ~ 89609890 (-) |
| G198912 | NA | other | downstream | 2864388 | 87322139 ~ 87326469 (-) |
| G198342 | LOC100194703 | other | downstream | 3286901 | 86903036 ~ 86903956 (-) |
| G197554 | NA | other | downstream | 4227192 | 85959845 ~ 85963665 (-) |
| G197498 | slc25a18 | other | downstream | 4347364 | 85831239 ~ 85843493 (-) |
| G202279 | NA | other | upstream | 186441 | 90377557 ~ 90441425 (-) |
| G203915 | rassf9 | other | upstream | 1398096 | 91589212 ~ 91591049 (-) |
| G204024 | NA | other | upstream | 1596071 | 91787187 ~ 91788103 (-) |
| LOC110499897 | LOC106573100 | other | upstream | 2206944 | 92398054 ~ 92443838 (-) |
| G205192 | NA | other | upstream | 2770928 | 92962044 ~ 92962934 (-) |
