G201896


Basic Information

Item Value
gene id G201896
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 90194510 ~ 90194758 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU228557
ggggtattgtgtgtagattgatgaggggaaaaatgatttaatccattttagaataaagctgtaacgtaacaaaatgtggaaaatgtcaaggggtctgaatactttccgaatgcactgtatacactccTCGGACAGTTTATTTGGTACACTCATCTATTACTGGTTTTGACCCCCTTTGCCTCCTGAATGGATACACCTGGTCAGCAAAAATGTTAAGATACGTTGTGGCGTTCAATCATTGTTCAATTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228557 True 249 lncRNA 0.39 1 90194510 90194758

Neighbor

gene id symbol gene type direction distance location
asz1 LOC106561550 coding upstream 24395 90130540 ~ 90170115 (+)
LOC110502295 LOC106561548 coding upstream 150686 89937146 ~ 90043824 (+)
LOC110499430 LOC106561547 coding upstream 265009 89924291 ~ 89929501 (+)
LOC110499418 LOC106561545 coding upstream 300091 89883357 ~ 89894419 (+)
LOC110499409 LOC100380677 coding upstream 311265 89830922 ~ 89883245 (+)
cpa5 cbpa1 coding downstream 383162 90577920 ~ 90594338 (+)
LOC110499537 LOC106561558 coding downstream 399692 90594450 ~ 90599294 (+)
poc1b poc1b coding downstream 412332 90607090 ~ 90667412 (+)
dusp6 dus6 coding downstream 506655 90701413 ~ 90706025 (+)
si:dkey-106n21.1 LOC106561561 coding downstream 598490 90793248 ~ 90868325 (+)
G201895 NA non-coding upstream 716 90193475 ~ 90193794 (+)
G201893 NA non-coding upstream 5041 90189082 ~ 90189469 (+)
G201892 NA non-coding upstream 5548 90188755 ~ 90188962 (+)
G201888 NA non-coding upstream 9674 90184621 ~ 90184836 (+)
G201851 NA non-coding upstream 58140 90136141 ~ 90136370 (+)
G201886 NA non-coding downstream 8121 90202879 ~ 90206418 (+)
G201898 NA non-coding downstream 13503 90208261 ~ 90211007 (+)
G201944 LOC100380720 non-coding downstream 105839 90300597 ~ 90321713 (+)
G201968 LOC106561553 non-coding downstream 143400 90338158 ~ 90340558 (+)
G202007 NA non-coding downstream 216827 90411585 ~ 90432515 (+)
LOC110499234 rbl2 other upstream 772072 89395057 ~ 89422438 (+)
G199223 hipk3 other upstream 2326543 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 2657582 87535936 ~ 87536928 (+)
G198784 NA other upstream 2697775 87493623 ~ 87496735 (+)
G198575 NA other upstream 3044020 87150202 ~ 87150490 (+)
G202039 NA other downstream 252360 90447118 ~ 90447573 (+)
G202185 NA other downstream 522184 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 1042267 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 1171579 91366282 ~ 91543765 (+)
G203414 NA other downstream 1427243 91622001 ~ 91624293 (+)

Expression


Co-expression Network