Gene
RNA
| Item | Value |
|---|---|
| gene id | G202247 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 90237568 ~ 90241681 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU228945 | True | 437 | lncRNA | 0.40 | 2 | 90237568 | 90241681 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499460 | LOC100136366 | coding | downstream | 112565 | 90044696 ~ 90125003 (-) |
| LOC110499439 | LOC106561546 | coding | downstream | 314848 | 89901507 ~ 89922720 (-) |
| LOC110499401 | lgr5 | coding | downstream | 416714 | 89793119 ~ 89820854 (-) |
| LOC110499378 | LOC106561541 | coding | downstream | 474196 | 89751743 ~ 89763372 (-) |
| tph2 | tph2 | coding | downstream | 489423 | 89740189 ~ 89748145 (-) |
| LOC110499482 | LOC100380720 | coding | upstream | 58865 | 90300546 ~ 90321779 (-) |
| met | LOC106561553 | coding | upstream | 96462 | 90338143 ~ 90427147 (-) |
| cav1 | LOC106561554 | coding | upstream | 212015 | 90453696 ~ 90463528 (-) |
| cav2 | LOC106561555 | coding | upstream | 223005 | 90464686 ~ 90470189 (-) |
| tes | LOC106561556 | coding | upstream | 315889 | 90557570 ~ 90576473 (-) |
| G202240 | NA | non-coding | downstream | 43951 | 90193336 ~ 90193617 (-) |
| G202239 | LOC106561551 | non-coding | downstream | 46452 | 90190857 ~ 90191116 (-) |
| G202233 | LOC106561551 | non-coding | downstream | 53027 | 90184321 ~ 90184541 (-) |
| G202227 | NA | non-coding | downstream | 59055 | 90178284 ~ 90178513 (-) |
| G201804 | NA | non-coding | downstream | 182503 | 90023044 ~ 90055065 (-) |
| G202282 | NA | non-coding | upstream | 88547 | 90330228 ~ 90365579 (-) |
| G202301 | NA | non-coding | upstream | 124935 | 90366616 ~ 90368419 (-) |
| G202304 | NA | non-coding | upstream | 128593 | 90370274 ~ 90407811 (-) |
| G202316 | NA | non-coding | upstream | 176436 | 90418117 ~ 90419600 (-) |
| G202338 | NA | non-coding | upstream | 206345 | 90448026 ~ 90448374 (-) |
| LOC110499346 | vps4a | other | downstream | 627678 | 89606837 ~ 89609890 (-) |
| G198912 | NA | other | downstream | 2911099 | 87322139 ~ 87326469 (-) |
| G198342 | LOC100194703 | other | downstream | 3333612 | 86903036 ~ 86903956 (-) |
| G197554 | NA | other | downstream | 4273903 | 85959845 ~ 85963665 (-) |
| G197498 | slc25a18 | other | downstream | 4394075 | 85831239 ~ 85843493 (-) |
| G202279 | NA | other | upstream | 135876 | 90377557 ~ 90441425 (-) |
| G203915 | rassf9 | other | upstream | 1347531 | 91589212 ~ 91591049 (-) |
| G204024 | NA | other | upstream | 1545506 | 91787187 ~ 91788103 (-) |
| LOC110499897 | LOC106573100 | other | upstream | 2156379 | 92398054 ~ 92443838 (-) |
| G205192 | NA | other | upstream | 2720363 | 92962044 ~ 92962934 (-) |
