Gene
RNA
| Item | Value |
|---|---|
| gene id | G202282 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 90330228 ~ 90365579 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU228982 | True | 959 | lncRNA | 0.39 | 2 | 90330228 | 90365579 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499482 | LOC100380720 | coding | downstream | 8449 | 90300546 ~ 90321779 (-) |
| LOC110502310 | st7 | coding | downstream | 31700 | 90197231 ~ 90298528 (-) |
| LOC110499460 | LOC100136366 | coding | downstream | 205225 | 90044696 ~ 90125003 (-) |
| LOC110499439 | LOC106561546 | coding | downstream | 407508 | 89901507 ~ 89922720 (-) |
| LOC110499401 | lgr5 | coding | downstream | 509374 | 89793119 ~ 89820854 (-) |
| cav1 | LOC106561554 | coding | upstream | 88117 | 90453696 ~ 90463528 (-) |
| cav2 | LOC106561555 | coding | upstream | 99107 | 90464686 ~ 90470189 (-) |
| tes | LOC106561556 | coding | upstream | 191991 | 90557570 ~ 90576473 (-) |
| cep41 | cep41 | coding | upstream | 233735 | 90599314 ~ 90606949 (-) |
| tmtc3 | tmtc3 | coding | upstream | 681152 | 91046731 ~ 91157443 (-) |
| G202247 | NA | non-coding | downstream | 88547 | 90237568 ~ 90241681 (-) |
| G202240 | NA | non-coding | downstream | 136611 | 90193336 ~ 90193617 (-) |
| G202239 | LOC106561551 | non-coding | downstream | 139112 | 90190857 ~ 90191116 (-) |
| G202233 | LOC106561551 | non-coding | downstream | 145687 | 90184321 ~ 90184541 (-) |
| G202227 | NA | non-coding | downstream | 151715 | 90178284 ~ 90178513 (-) |
| G202301 | NA | non-coding | upstream | 1037 | 90366616 ~ 90368419 (-) |
| G202304 | NA | non-coding | upstream | 4695 | 90370274 ~ 90407811 (-) |
| G202316 | NA | non-coding | upstream | 52538 | 90418117 ~ 90419600 (-) |
| G202338 | NA | non-coding | upstream | 82447 | 90448026 ~ 90448374 (-) |
| LOC110499346 | vps4a | other | downstream | 720338 | 89606837 ~ 89609890 (-) |
| G198912 | NA | other | downstream | 3003759 | 87322139 ~ 87326469 (-) |
| G198342 | LOC100194703 | other | downstream | 3426272 | 86903036 ~ 86903956 (-) |
| G197554 | NA | other | downstream | 4366563 | 85959845 ~ 85963665 (-) |
| G197498 | slc25a18 | other | downstream | 4486735 | 85831239 ~ 85843493 (-) |
| G202279 | NA | other | upstream | 11978 | 90377557 ~ 90441425 (-) |
| G203915 | rassf9 | other | upstream | 1223633 | 91589212 ~ 91591049 (-) |
| G204024 | NA | other | upstream | 1421608 | 91787187 ~ 91788103 (-) |
| LOC110499897 | LOC106573100 | other | upstream | 2032481 | 92398054 ~ 92443838 (-) |
| G205192 | NA | other | upstream | 2596465 | 92962044 ~ 92962934 (-) |
