G202007


Basic Information

Item Value
gene id G202007
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 90411585 ~ 90432515 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU228696
TCTGGGCTCTGGctgggccactcaaggactttcagagacttgtcccgaagccactcctgtgttgacttggctgtgtgcttagggtcgttgtactgttggaaggtgaaccttcgccccagtctgaggtcctgagcgctctggagcacgttttcatcaacgatctctctgtactttactccattcatctttccctcgatcctgactagtctcccagtcccttccactGAATAACATCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU228696 True 236 lncRNA 0.53 2 90411585 90432515

Neighbor

gene id symbol gene type direction distance location
wnt2 LOC106561551 coding upstream 214649 90183281 ~ 90196936 (+)
asz1 LOC106561550 coding upstream 241470 90130540 ~ 90170115 (+)
LOC110502295 LOC106561548 coding upstream 367761 89937146 ~ 90043824 (+)
LOC110499430 LOC106561547 coding upstream 482084 89924291 ~ 89929501 (+)
LOC110499418 LOC106561545 coding upstream 517166 89883357 ~ 89894419 (+)
cpa5 cbpa1 coding downstream 145405 90577920 ~ 90594338 (+)
LOC110499537 LOC106561558 coding downstream 161935 90594450 ~ 90599294 (+)
poc1b poc1b coding downstream 174575 90607090 ~ 90667412 (+)
dusp6 dus6 coding downstream 268898 90701413 ~ 90706025 (+)
si:dkey-106n21.1 LOC106561561 coding downstream 360733 90793248 ~ 90868325 (+)
G201968 LOC106561553 non-coding upstream 71027 90338158 ~ 90340558 (+)
G201944 LOC100380720 non-coding upstream 89872 90300597 ~ 90321713 (+)
G201898 NA non-coding upstream 200578 90208261 ~ 90211007 (+)
G201886 NA non-coding upstream 205167 90202879 ~ 90206418 (+)
G201896 NA non-coding upstream 216827 90194510 ~ 90194758 (+)
G202035 NA non-coding downstream 9326 90441841 ~ 90442145 (+)
G202037 NA non-coding downstream 11679 90444194 ~ 90444483 (+)
G202038 NA non-coding downstream 12755 90445270 ~ 90445562 (+)
G202040 NA non-coding downstream 15375 90447890 ~ 90448454 (+)
G202041 NA non-coding downstream 17517 90450032 ~ 90450237 (+)
LOC110499234 rbl2 other upstream 989147 89395057 ~ 89422438 (+)
G199223 hipk3 other upstream 2543618 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 2874657 87535936 ~ 87536928 (+)
G198784 NA other upstream 2914850 87493623 ~ 87496735 (+)
G198575 NA other upstream 3261095 87150202 ~ 87150490 (+)
G202039 NA other downstream 14603 90447118 ~ 90447573 (+)
G202185 NA other downstream 284427 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 804510 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 933822 91366282 ~ 91543765 (+)
G203414 NA other downstream 1189486 91622001 ~ 91624293 (+)

Expression


Co-expression Network