G202035


Basic Information

Item Value
gene id G202035
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 90441841 ~ 90442145 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU228725
tatatataaactcagtaaaaaaaagaaacgtccctttttcaggacactgtctttcaaagataattcgtaaaaatccaaataactccacagatctttattgtaaagggtttaaacactgtttcccatgcttcttcaatgaaccataaacaattaatgaacatgcacctgtggaacagtcgttaagacactaacagcttacagatggtaggcaattaaggtcacagttatgacaacttaggacactactaaagaggcctttctattgactgaaaaacaccaaaagaaagatgcccagggtccctgct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228725 True 305 lncRNA 0.39 1 90441841 90442145

Neighbor

gene id symbol gene type direction distance location
wnt2 LOC106561551 coding upstream 244905 90183281 ~ 90196936 (+)
asz1 LOC106561550 coding upstream 271726 90130540 ~ 90170115 (+)
LOC110502295 LOC106561548 coding upstream 398017 89937146 ~ 90043824 (+)
LOC110499430 LOC106561547 coding upstream 512340 89924291 ~ 89929501 (+)
LOC110499418 LOC106561545 coding upstream 547422 89883357 ~ 89894419 (+)
cpa5 cbpa1 coding downstream 135775 90577920 ~ 90594338 (+)
LOC110499537 LOC106561558 coding downstream 152305 90594450 ~ 90599294 (+)
poc1b poc1b coding downstream 164945 90607090 ~ 90667412 (+)
dusp6 dus6 coding downstream 259268 90701413 ~ 90706025 (+)
si:dkey-106n21.1 LOC106561561 coding downstream 351103 90793248 ~ 90868325 (+)
G202007 NA non-coding upstream 9326 90411585 ~ 90432515 (+)
G201968 LOC106561553 non-coding upstream 101283 90338158 ~ 90340558 (+)
G201944 LOC100380720 non-coding upstream 120128 90300597 ~ 90321713 (+)
G201898 NA non-coding upstream 230834 90208261 ~ 90211007 (+)
G201886 NA non-coding upstream 235423 90202879 ~ 90206418 (+)
G202037 NA non-coding downstream 2049 90444194 ~ 90444483 (+)
G202038 NA non-coding downstream 3125 90445270 ~ 90445562 (+)
G202040 NA non-coding downstream 5745 90447890 ~ 90448454 (+)
G202041 NA non-coding downstream 7887 90450032 ~ 90450237 (+)
G202052 NA non-coding downstream 29935 90472080 ~ 90472306 (+)
LOC110499234 rbl2 other upstream 1019403 89395057 ~ 89422438 (+)
G199223 hipk3 other upstream 2573874 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 2904913 87535936 ~ 87536928 (+)
G198784 NA other upstream 2945106 87493623 ~ 87496735 (+)
G198575 NA other upstream 3291351 87150202 ~ 87150490 (+)
G202039 NA other downstream 4973 90447118 ~ 90447573 (+)
G202185 NA other downstream 274797 90716942 ~ 90717421 (+)
LOC110499641 LOC106561583 other downstream 794880 91235465 ~ 91239737 (+)
mgat4c LOC106561589 other downstream 924192 91366282 ~ 91543765 (+)
G203414 NA other downstream 1179856 91622001 ~ 91624293 (+)

Expression


Co-expression Network