Gene
RNA
| Item | Value |
|---|---|
| gene id | G202038 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 90445270 ~ 90445562 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU228728 | True | 293 | lncRNA | 0.37 | 1 | 90445270 | 90445562 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| wnt2 | LOC106561551 | coding | upstream | 248334 | 90183281 ~ 90196936 (+) |
| asz1 | LOC106561550 | coding | upstream | 275155 | 90130540 ~ 90170115 (+) |
| LOC110502295 | LOC106561548 | coding | upstream | 401446 | 89937146 ~ 90043824 (+) |
| LOC110499430 | LOC106561547 | coding | upstream | 515769 | 89924291 ~ 89929501 (+) |
| LOC110499418 | LOC106561545 | coding | upstream | 550851 | 89883357 ~ 89894419 (+) |
| cpa5 | cbpa1 | coding | downstream | 132358 | 90577920 ~ 90594338 (+) |
| LOC110499537 | LOC106561558 | coding | downstream | 148888 | 90594450 ~ 90599294 (+) |
| poc1b | poc1b | coding | downstream | 161528 | 90607090 ~ 90667412 (+) |
| dusp6 | dus6 | coding | downstream | 255851 | 90701413 ~ 90706025 (+) |
| si:dkey-106n21.1 | LOC106561561 | coding | downstream | 347686 | 90793248 ~ 90868325 (+) |
| G202037 | NA | non-coding | upstream | 787 | 90444194 ~ 90444483 (+) |
| G202035 | NA | non-coding | upstream | 3125 | 90441841 ~ 90442145 (+) |
| G202007 | NA | non-coding | upstream | 12755 | 90411585 ~ 90432515 (+) |
| G201968 | LOC106561553 | non-coding | upstream | 104712 | 90338158 ~ 90340558 (+) |
| G201944 | LOC100380720 | non-coding | upstream | 123557 | 90300597 ~ 90321713 (+) |
| G202040 | NA | non-coding | downstream | 2328 | 90447890 ~ 90448454 (+) |
| G202041 | NA | non-coding | downstream | 4470 | 90450032 ~ 90450237 (+) |
| G202052 | NA | non-coding | downstream | 26518 | 90472080 ~ 90472306 (+) |
| G202055 | NA | non-coding | downstream | 32866 | 90478428 ~ 90478647 (+) |
| G202057 | NA | non-coding | downstream | 37404 | 90482966 ~ 90483208 (+) |
| LOC110499234 | rbl2 | other | upstream | 1022832 | 89395057 ~ 89422438 (+) |
| G199223 | hipk3 | other | upstream | 2577303 | 87866877 ~ 87867967 (+) |
| G198811 | LOC106561481 | other | upstream | 2908342 | 87535936 ~ 87536928 (+) |
| G198784 | NA | other | upstream | 2948535 | 87493623 ~ 87496735 (+) |
| G198575 | NA | other | upstream | 3294780 | 87150202 ~ 87150490 (+) |
| G202039 | NA | other | downstream | 1556 | 90447118 ~ 90447573 (+) |
| G202185 | NA | other | downstream | 271380 | 90716942 ~ 90717421 (+) |
| LOC110499641 | LOC106561583 | other | downstream | 791463 | 91235465 ~ 91239737 (+) |
| mgat4c | LOC106561589 | other | downstream | 920775 | 91366282 ~ 91543765 (+) |
| G203414 | NA | other | downstream | 1176439 | 91622001 ~ 91624293 (+) |
