Gene
RNA
| Item | Value |
|---|---|
| gene id | G202338 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 90448026 ~ 90448374 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU229053 | True | 349 | lncRNA | 0.47 | 1 | 90448026 | 90448374 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| met | LOC106561553 | coding | downstream | 20879 | 90338143 ~ 90427147 (-) |
| LOC110499482 | LOC100380720 | coding | downstream | 126247 | 90300546 ~ 90321779 (-) |
| LOC110502310 | st7 | coding | downstream | 149498 | 90197231 ~ 90298528 (-) |
| LOC110499460 | LOC100136366 | coding | downstream | 323023 | 90044696 ~ 90125003 (-) |
| LOC110499439 | LOC106561546 | coding | downstream | 525306 | 89901507 ~ 89922720 (-) |
| cav1 | LOC106561554 | coding | upstream | 5322 | 90453696 ~ 90463528 (-) |
| cav2 | LOC106561555 | coding | upstream | 16312 | 90464686 ~ 90470189 (-) |
| tes | LOC106561556 | coding | upstream | 109196 | 90557570 ~ 90576473 (-) |
| cep41 | cep41 | coding | upstream | 150940 | 90599314 ~ 90606949 (-) |
| tmtc3 | tmtc3 | coding | upstream | 598357 | 91046731 ~ 91157443 (-) |
| G202316 | NA | non-coding | downstream | 28426 | 90418117 ~ 90419600 (-) |
| G202304 | NA | non-coding | downstream | 40215 | 90370274 ~ 90407811 (-) |
| G202301 | NA | non-coding | downstream | 79607 | 90366616 ~ 90368419 (-) |
| G202282 | NA | non-coding | downstream | 82447 | 90330228 ~ 90365579 (-) |
| G202247 | NA | non-coding | downstream | 206345 | 90237568 ~ 90241681 (-) |
| G202348 | NA | non-coding | upstream | 23706 | 90472080 ~ 90472317 (-) |
| G202349 | NA | non-coding | upstream | 25124 | 90473498 ~ 90473702 (-) |
| G202353 | NA | non-coding | upstream | 29327 | 90477701 ~ 90477903 (-) |
| G202356 | NA | non-coding | upstream | 32464 | 90480838 ~ 90481049 (-) |
| G202279 | NA | other | downstream | 6601 | 90377557 ~ 90441425 (-) |
| LOC110499346 | vps4a | other | downstream | 838136 | 89606837 ~ 89609890 (-) |
| G198912 | NA | other | downstream | 3121557 | 87322139 ~ 87326469 (-) |
| G198342 | LOC100194703 | other | downstream | 3544070 | 86903036 ~ 86903956 (-) |
| G197554 | NA | other | downstream | 4484361 | 85959845 ~ 85963665 (-) |
| G203915 | rassf9 | other | upstream | 1140838 | 91589212 ~ 91591049 (-) |
| G204024 | NA | other | upstream | 1338813 | 91787187 ~ 91788103 (-) |
| LOC110499897 | LOC106573100 | other | upstream | 1949686 | 92398054 ~ 92443838 (-) |
| G205192 | NA | other | upstream | 2513670 | 92962044 ~ 92962934 (-) |
| G206742 | LOC106561643 | other | upstream | 3864050 | 94312424 ~ 94312774 (-) |
