Gene
RNA
| Item | Value |
|---|---|
| gene id | G202427 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 90597765 ~ 90597978 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: carboxypeptidase A1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU229154 | True | 214 | lncRNA | 0.52 | 1 | 90597765 | 90597978 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tes | LOC106561556 | coding | downstream | 21292 | 90557570 ~ 90576473 (-) |
| cav2 | LOC106561555 | coding | downstream | 127576 | 90464686 ~ 90470189 (-) |
| cav1 | LOC106561554 | coding | downstream | 134237 | 90453696 ~ 90463528 (-) |
| met | LOC106561553 | coding | downstream | 170618 | 90338143 ~ 90427147 (-) |
| LOC110499482 | LOC100380720 | coding | downstream | 275986 | 90300546 ~ 90321779 (-) |
| cep41 | cep41 | coding | upstream | 1336 | 90599314 ~ 90606949 (-) |
| tmtc3 | tmtc3 | coding | upstream | 448753 | 91046731 ~ 91157443 (-) |
| c2h12orf29 | cssa10h12orf29 | coding | upstream | 616689 | 91214667 ~ 91219570 (-) |
| lyve1b | LOC106561566 | coding | upstream | 629120 | 91227098 ~ 91230204 (-) |
| eif4g2b | LOC106561567 | coding | upstream | 641766 | 91239744 ~ 91254841 (-) |
| G202426 | NA | non-coding | downstream | 338 | 90597222 ~ 90597427 (-) |
| G202419 | cbpa1 | non-coding | downstream | 4649 | 90590350 ~ 90593116 (-) |
| G202388 | NA | non-coding | downstream | 69058 | 90528074 ~ 90528707 (-) |
| G202370 | NA | non-coding | downstream | 101980 | 90495577 ~ 90495785 (-) |
| G202358 | NA | non-coding | downstream | 115253 | 90482155 ~ 90482512 (-) |
| G202428 | NA | non-coding | upstream | 201 | 90598179 ~ 90598453 (-) |
| G202485 | NA | non-coding | upstream | 101344 | 90699322 ~ 90699544 (-) |
| G202494 | NA | non-coding | upstream | 115797 | 90713775 ~ 90714018 (-) |
| G202505 | NA | non-coding | upstream | 124906 | 90722884 ~ 90723135 (-) |
| G202863 | NA | non-coding | upstream | 144186 | 90742164 ~ 90742398 (-) |
| G202279 | NA | other | downstream | 156340 | 90377557 ~ 90441425 (-) |
| LOC110499346 | vps4a | other | downstream | 987875 | 89606837 ~ 89609890 (-) |
| G198912 | NA | other | downstream | 3271296 | 87322139 ~ 87326469 (-) |
| G198342 | LOC100194703 | other | downstream | 3693809 | 86903036 ~ 86903956 (-) |
| G197554 | NA | other | downstream | 4634100 | 85959845 ~ 85963665 (-) |
| G203915 | rassf9 | other | upstream | 991234 | 91589212 ~ 91591049 (-) |
| G204024 | NA | other | upstream | 1189209 | 91787187 ~ 91788103 (-) |
| LOC110499897 | LOC106573100 | other | upstream | 1800082 | 92398054 ~ 92443838 (-) |
| G205192 | NA | other | upstream | 2364066 | 92962044 ~ 92962934 (-) |
| G206742 | LOC106561643 | other | upstream | 3714446 | 94312424 ~ 94312774 (-) |
