G202180


Basic Information

Item Value
gene id G202180
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 90708576 ~ 90708831 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU228874
aaaaacagtttctatctcaaggccatcagactgttaaccagccatcactaacattgagtggctgctgccagcatactgactcaactccagccactttaataatggaaaaatgtatgtaatcaatttatcactagccactttatattaTATAAcgtttacttaccctacattactcatctcatatgtatatactgtacgctataccatctactgcatcttgccatcttgatgtacaGTAATTAAATGTATctccagc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228874 True 256 lncRNA 0.36 1 90708576 90708831

Neighbor

gene id symbol gene type direction distance location
dusp6 dus6 coding upstream 2551 90701413 ~ 90706025 (+)
poc1b poc1b coding upstream 41164 90607090 ~ 90667412 (+)
LOC110499537 LOC106561558 coding upstream 109282 90594450 ~ 90599294 (+)
cpa5 cbpa1 coding upstream 114238 90577920 ~ 90594338 (+)
wnt2 LOC106561551 coding upstream 511640 90183281 ~ 90196936 (+)
si:dkey-106n21.1 LOC106561561 coding downstream 84417 90793248 ~ 90868325 (+)
kitlga LOC106561562 coding downstream 229515 90938346 ~ 90971318 (+)
cep290 cep290 coding downstream 448630 91157461 ~ 91213269 (+)
LOC110499641 LOC106561583 coding downstream 526634 91235465 ~ 91239737 (+)
mgat4c LOC106561589 coding downstream 657451 91366282 ~ 91543765 (+)
G202057 NA non-coding upstream 225368 90482966 ~ 90483208 (+)
G202055 NA non-coding upstream 229929 90478428 ~ 90478647 (+)
G202052 NA non-coding upstream 236270 90472080 ~ 90472306 (+)
G202041 NA non-coding upstream 258339 90450032 ~ 90450237 (+)
G202040 NA non-coding upstream 260122 90447890 ~ 90448454 (+)
G202514 NA non-coding downstream 26694 90735525 ~ 90735817 (+)
G202534 NA non-coding downstream 59029 90767860 ~ 90768063 (+)
G202555 NA non-coding downstream 78207 90787038 ~ 90787317 (+)
G202558 NA non-coding downstream 80621 90789452 ~ 90789667 (+)
G202656 yo84 non-coding downstream 247579 90956410 ~ 91052753 (+)
G202039 NA other upstream 261003 90447118 ~ 90447573 (+)
LOC110499234 rbl2 other upstream 1286138 89395057 ~ 89422438 (+)
G199223 hipk3 other upstream 2840609 87866877 ~ 87867967 (+)
G198811 LOC106561481 other upstream 3171648 87535936 ~ 87536928 (+)
G198784 NA other upstream 3211841 87493623 ~ 87496735 (+)
G202185 NA other downstream 8111 90716942 ~ 90717421 (+)
G203414 NA other downstream 913170 91622001 ~ 91624293 (+)
G203438 LOC106561592 other downstream 960005 91668836 ~ 91671899 (+)

Expression


Co-expression Network