G203197


Basic Information

Item Value
gene id G203197
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 91279751 ~ 91279959 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU229990
gtatatagcgccatccatcattccttcaattctgaccagtttcccagtccctgccgatgaaaacatccccacagcatgacgctgccaccaccatgcttccctatggggatggtgttctcagggtgatgagaggtgttgagtttgcaccagacatagcattttccttgatggtcaaaaagcttaattttagtctaatctgaccagagtac

Function

NR:

description
PREDICTED: pre-rRNA-processing protein TSR1 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229990 True 209 lncRNA 0.52 1 91279751 91279959

Neighbor

gene id symbol gene type direction distance location
LOC110499641 LOC106561583 coding upstream 40014 91235465 ~ 91239737 (+)
cep290 cep290 coding upstream 66482 91157461 ~ 91213269 (+)
kitlga LOC106561562 coding upstream 308433 90938346 ~ 90971318 (+)
si:dkey-106n21.1 LOC106561561 coding upstream 411426 90793248 ~ 90868325 (+)
dusp6 dus6 coding upstream 573726 90701413 ~ 90706025 (+)
mgat4c LOC106561589 coding downstream 86323 91366282 ~ 91543765 (+)
rassf9 rassf9 coding downstream 302625 91582584 ~ 91591130 (+)
slc6a15 LOC106561596 coding downstream 475000 91754959 ~ 91779981 (+)
LOC110499735 LOC106561597 coding downstream 556855 91836814 ~ 91852352 (+)
LOC110502363 LOC106561595 coding downstream 573893 91853852 ~ 91933354 (+)
G202844 NA non-coding upstream 24962 91252360 ~ 91254789 (+)
G202656 yo84 non-coding upstream 226998 90956410 ~ 91052753 (+)
G202732 NA non-coding upstream 235525 91043292 ~ 91044226 (+)
G202558 NA non-coding upstream 490084 90789452 ~ 90789667 (+)
G203251 NA non-coding downstream 88600 91368559 ~ 91369003 (+)
G203281 NA non-coding downstream 132054 91412013 ~ 91413548 (+)
G203415 NA non-coding downstream 338403 91618362 ~ 91644022 (+)
G203503 NA non-coding downstream 488801 91768760 ~ 91769152 (+)
G203547 NA non-coding downstream 542360 91822319 ~ 91823796 (+)
G202185 NA other upstream 562330 90716942 ~ 90717421 (+)
G202039 NA other upstream 832178 90447118 ~ 90447573 (+)
LOC110499234 rbl2 other upstream 1857313 89395057 ~ 89422438 (+)
G199223 hipk3 other upstream 3411784 87866877 ~ 87867967 (+)
G203414 NA other downstream 342042 91622001 ~ 91624293 (+)
G203438 LOC106561592 other downstream 388877 91668836 ~ 91671899 (+)
G203551 NA other downstream 546890 91826849 ~ 91847400 (+)
G203646 cpa2 other downstream 741796 92021755 ~ 92024742 (+)

Expression


Co-expression Network