G203915 (rassf9)


Basic Information

Item Value
gene id G203915
gene name rassf9
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 91589212 ~ 91591049 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU230773
CTTTCATATTACATTAATGATAGTGACTACCTGCACACATATTGAGAAATGTAGAGTTTGGCTTCATATGCTTTTGGAATGTATATAAACATACAGTAACAAATAGTCTAATGCTCCAAAACAAGAACACAAATAAATATAGTTTTCCCTTACATCTCATTGTTCTTTTGTCATTTTGATGAATCTCTGTGACATTATATCTTATAGCTTATGAAGAAAATCTGAATAGATAATGGTTTACAGTTTATAACAAAGGCAGACCATTTTAATATAAAACAGTATCAAATTAGTCCGCCAGGCAAATAGTGCATATAGCGGGATTGTGTATTGCCTTCTGAGGGGAATCCAGAGAGGCAGACATCTCAGACATCAGTGTCCAGCGGTGGCAGGATCATGTCCAGACAAGGAGACAGTGAGTCCTGACTGTGTGTTGAGCTGATCCCTGTGTCTGAGTCTGTGTCTGTAACATCTGTAGGGGACAGGCTGTGTTTCAGTCTCACTGCCTGTGGAACAATGCATGGGGCCGGGCATTTCATAGTCCCGAGCCTAGGCGTTTCCTGCACGCTGTCCCCCACCTGCAGTGTGCTCAGCTGGGAAGCCAGCTGCCAGCAATCCTGGTCCTTGGAGAACAGTGTGGATTCATAGCCCTTCAGCTCCTTCTCCAGCTGGGCCGTTTGGATGTGAAGGGACACGCCGGTGCGCAGACTAAGCCTCAGTTCGGCCTGCAGTCTCTCCAGTTCTGCCGCTTCCCAGGACAGGTCTGGGTCAGAAGTTACTCCTGCCGCTGCCCCCTGTAACTGAGTATCCTTGTCGGGGACCTCCGGCAACATTAACATGGCCCTCGTCAGCTCTACATCGATGTCCTGGGACAGTTGGGCTATAAGCTCCTCGTGCCTGAGCAGCTGCATCTCCAACTGGGCCACACTGTCACTAGTATACACgcactcctgcagcagctcctGCTCTGAAACCCCTGGCTGGCTGTCCAGGTTCTGGTTGTGGCTGTGGGGGAAGGAGATCGGGGAGAGTGAGGAGAATCCCTCATGGAGAAGCTCTGTATCCTGTTGTCCTCCCTGCAGCTCCATCTCGAAGCGTTCCATCTCACAGTCCAGCTCCCTCATCCTCTGGATCTGATGCCGGATGGTGTGGTCCTGTTGGATAAGCAGCTGAACCATCCTGTCtatctcctcgctgcccggagaAGATCCCACTACCCTCTTCTCCTTGTGGATCTTCTCCAGCTTCCTGAAGGCCTTCTTCACCATCCGTTTCTGTCTCTCCACTGGCAGTGACTGGGAGTACTGGGCCGGGCCTTGCTCCCATCTCTTAGCCCCCTTAGCCCCCTTTAATTTGGCCCCCTTCTTGCAGCCTGCTTGGGGTACAAAATCGCTGGCCTTGACCAGGGTGAACTGGATGAACGGTCGCTGGTCTCCCCAGGCATTCCATAGCCTGAGGATGCGGGTTAATGGGGGCAGAGCCCTCTCAAAGCCTTTCCAGCGCTCTAGCAGGCAGAAGTCTTTAGGGTCGCCATGCAGAATTTTCTTGTTCTCAGGGATGGTCTTGTGGTCGTCCAGCAAGGCCTGCACTATGTCAGCACACGTTGTGTGTTTGGTGACACCGCACACCACCTTCTcctcatcacacacagacacctggATCTCCTTTCCTAGCACAGTTTCCTTGTCATCTTTGTC

Function

symbol description
rassf9 Predicted to act upstream of or within endosomal transport and signal transduction. Orthologous to human RASSF9 (Ras association domain family member 9).

NR:

description
ras association domain-containing protein 9

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230773 True 1694 TUCP 0.51 2 91589212 91591049

Neighbor

gene id symbol gene type direction distance location
nts LOC106561634 coding downstream 7906 91560700 ~ 91581306 (-)
eif4g2b LOC106561567 coding downstream 334371 91239744 ~ 91254841 (-)
lyve1b LOC106561566 coding downstream 359008 91227098 ~ 91230204 (-)
c2h12orf29 cssa10h12orf29 coding downstream 369642 91214667 ~ 91219570 (-)
tmtc3 tmtc3 coding downstream 431769 91046731 ~ 91157443 (-)
LOC110499699 NA coding upstream 15696 91606745 ~ 91624204 (-)
alx1 LOC106561592 coding upstream 77348 91668397 ~ 91673730 (-)
lrriq1 lrriq1 coding upstream 100804 91691853 ~ 91740829 (-)
lrrk2 lrrk2 coding upstream 189152 91780201 ~ 91837180 (-)
LOC110499762 cbpa2 coding upstream 430706 92021755 ~ 92027773 (-)
G203829 NA non-coding downstream 88655 91464310 ~ 91500557 (-)
G203780 NA non-coding downstream 190730 91398064 ~ 91398482 (-)
G203163 NA non-coding downstream 350398 91238517 ~ 91238814 (-)
G203162 NA non-coding downstream 350775 91238230 ~ 91238437 (-)
G202932 NA non-coding downstream 662200 90850730 ~ 90927012 (-)
G204018 NA non-coding upstream 168689 91759738 ~ 91801240 (-)
G203975 LOC106561596 non-coding upstream 180253 91771302 ~ 91773128 (-)
G204050 NA non-coding upstream 260268 91851317 ~ 91852018 (-)
G204052 NA non-coding upstream 262246 91853295 ~ 91853597 (-)
G204096 NA non-coding upstream 310908 91901957 ~ 91905169 (-)
G202279 NA other downstream 1147787 90377557 ~ 90441425 (-)
LOC110499346 vps4a other downstream 1979322 89606837 ~ 89609890 (-)
G198912 NA other downstream 4262743 87322139 ~ 87326469 (-)
G198342 LOC100194703 other downstream 4685256 86903036 ~ 86903956 (-)
G197554 NA other downstream 5625547 85959845 ~ 85963665 (-)
G204024 NA other upstream 196138 91787187 ~ 91788103 (-)
LOC110499897 LOC106573100 other upstream 807011 92398054 ~ 92443838 (-)
G205192 NA other upstream 1370995 92962044 ~ 92962934 (-)
G206742 LOC106561643 other upstream 2721375 94312424 ~ 94312774 (-)
G206744 LOC106561643 other upstream 2722341 94313390 ~ 94313918 (-)

Expression


Co-expression Network