Gene
RNA
| Item | Value |
|---|---|
| gene id | G204018 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 91759738 ~ 91801240 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU230889 | True | 401 | lncRNA | 0.53 | 2 | 91759738 | 91801240 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lrriq1 | lrriq1 | coding | downstream | 18909 | 91691853 ~ 91740829 (-) |
| alx1 | LOC106561592 | coding | downstream | 86008 | 91668397 ~ 91673730 (-) |
| LOC110499699 | NA | coding | downstream | 135534 | 91606745 ~ 91624204 (-) |
| nts | LOC106561634 | coding | downstream | 178432 | 91560700 ~ 91581306 (-) |
| eif4g2b | LOC106561567 | coding | downstream | 504897 | 91239744 ~ 91254841 (-) |
| LOC110499762 | cbpa2 | coding | upstream | 220515 | 92021755 ~ 92027773 (-) |
| LOC110499841 | LOC106561606 | coding | upstream | 352144 | 92153384 ~ 92190372 (-) |
| LOC110533906 | NA | coding | upstream | 396096 | 92197336 ~ 92202031 (-) |
| LOC110502383 | LOC106561607 | coding | upstream | 409090 | 92210330 ~ 92228748 (-) |
| cry2 | LOC106561609 | coding | upstream | 432191 | 92233431 ~ 92265019 (-) |
| G203829 | NA | non-coding | downstream | 259181 | 91464310 ~ 91500557 (-) |
| G203780 | NA | non-coding | downstream | 361256 | 91398064 ~ 91398482 (-) |
| G203163 | NA | non-coding | downstream | 520924 | 91238517 ~ 91238814 (-) |
| G203162 | NA | non-coding | downstream | 521301 | 91238230 ~ 91238437 (-) |
| G202932 | NA | non-coding | downstream | 832726 | 90850730 ~ 90927012 (-) |
| G204050 | NA | non-coding | upstream | 50077 | 91851317 ~ 91852018 (-) |
| G204052 | NA | non-coding | upstream | 52055 | 91853295 ~ 91853597 (-) |
| G204096 | NA | non-coding | upstream | 100717 | 91901957 ~ 91905169 (-) |
| G204088 | NA | non-coding | upstream | 131905 | 91933145 ~ 91935174 (-) |
| G204165 | NA | non-coding | upstream | 250653 | 92051893 ~ 92052201 (-) |
| G203915 | rassf9 | other | downstream | 168689 | 91589212 ~ 91591049 (-) |
| G202279 | NA | other | downstream | 1318313 | 90377557 ~ 90441425 (-) |
| LOC110499346 | vps4a | other | downstream | 2149848 | 89606837 ~ 89609890 (-) |
| G198912 | NA | other | downstream | 4433269 | 87322139 ~ 87326469 (-) |
| G198342 | LOC100194703 | other | downstream | 4855782 | 86903036 ~ 86903956 (-) |
| LOC110499897 | LOC106573100 | other | upstream | 596820 | 92398054 ~ 92443838 (-) |
| G205192 | NA | other | upstream | 1160804 | 92962044 ~ 92962934 (-) |
| G206742 | LOC106561643 | other | upstream | 2511184 | 94312424 ~ 94312774 (-) |
| G206744 | LOC106561643 | other | upstream | 2512150 | 94313390 ~ 94313918 (-) |
| G206750 | NA | other | upstream | 2526670 | 94327910 ~ 94328183 (-) |
