G203559


Basic Information

Item Value
gene id G203559
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 91853213 ~ 91853577 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU230385
taaaaaatatattttaaaaagagCACTAGATGATTCACAGGTCATATAGGCAAAGTAGCCTACTAAAACATGTTATTAAATGGGTATTTACATCTGTAGTAATACCAGATGATTGCATGGGGGCGCTGTTTAACCTGAGTGACAGTGTTACCGCAAAAGGTGATATATCATAGTAGTAATTCAGAGTGTATGACACTAAAAAGTCATGGTTACATTAAATCCTCAGCTACAACAAGAAAGCCACAAGCATCTCACGGGCTAGAGGAAAATGAAAGGGCACTGATTTGATGACAACAAAGAGTTCTGTATAGATGGAGCCTACCAACTGCTGTGTGTCTCAACTGTGTGTAAGTGTGTTGGGGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230385 True 365 lncRNA 0.38 1 91853213 91853577

Neighbor

gene id symbol gene type direction distance location
LOC110499735 LOC106561597 coding upstream 861 91836814 ~ 91852352 (+)
slc6a15 LOC106561596 coding upstream 73232 91754959 ~ 91779981 (+)
rassf9 rassf9 coding upstream 262083 91582584 ~ 91591130 (+)
mgat4c LOC106561589 coding upstream 309448 91366282 ~ 91543765 (+)
LOC110499641 LOC106561583 coding upstream 613476 91235465 ~ 91239737 (+)
LOC110502363 LOC106561595 coding downstream 275 91853852 ~ 91933354 (+)
LOC110502371 LOC106561599 coding downstream 83575 91937152 ~ 92008067 (+)
smc1b LOC106561601 coding downstream 174857 92028434 ~ 92049230 (+)
LOC110502379 NA coding downstream 203985 92057562 ~ 92063708 (+)
borcs5 LOC106561602 coding downstream 212021 92065598 ~ 92072317 (+)
G203547 NA non-coding upstream 29417 91822319 ~ 91823796 (+)
G203503 NA non-coding upstream 84061 91768760 ~ 91769152 (+)
G203415 NA non-coding upstream 209191 91618362 ~ 91644022 (+)
G203281 NA non-coding upstream 439665 91412013 ~ 91413548 (+)
G203251 NA non-coding upstream 484210 91368559 ~ 91369003 (+)
G203579 NA non-coding downstream 7816 91861393 ~ 91861963 (+)
G203561 NA non-coding downstream 65293 91918870 ~ 91919819 (+)
G203629 NA non-coding downstream 137295 91990872 ~ 91993704 (+)
G203671 NA non-coding downstream 211683 92065260 ~ 92065481 (+)
G203674 NA non-coding downstream 221051 92074628 ~ 92074860 (+)
G203551 NA other upstream 5813 91826849 ~ 91847400 (+)
G203438 LOC106561592 other upstream 181314 91668836 ~ 91671899 (+)
G203414 NA other upstream 228920 91622001 ~ 91624293 (+)
G203646 cpa2 other downstream 168178 92021755 ~ 92024742 (+)
G204240 ckap5 other downstream 303698 92157275 ~ 92159903 (+)
G204593 NA other downstream 827769 92681346 ~ 92682355 (+)
LOC110499942 LOC106561637 other downstream 983847 92837196 ~ 92839440 (+)
G205404 NA other downstream 1517816 93371393 ~ 93388550 (+)

Expression


Co-expression Network