Gene
RNA
| Item | Value |
|---|---|
| gene id | G203579 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 91861393 ~ 91861963 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU230406 | True | 223 | lncRNA | 0.47 | 2 | 91861393 | 91861963 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499735 | LOC106561597 | coding | upstream | 9041 | 91836814 ~ 91852352 (+) |
| slc6a15 | LOC106561596 | coding | upstream | 81412 | 91754959 ~ 91779981 (+) |
| rassf9 | rassf9 | coding | upstream | 270263 | 91582584 ~ 91591130 (+) |
| mgat4c | LOC106561589 | coding | upstream | 317628 | 91366282 ~ 91543765 (+) |
| LOC110499641 | LOC106561583 | coding | upstream | 621656 | 91235465 ~ 91239737 (+) |
| LOC110502371 | LOC106561599 | coding | downstream | 75189 | 91937152 ~ 92008067 (+) |
| smc1b | LOC106561601 | coding | downstream | 166471 | 92028434 ~ 92049230 (+) |
| LOC110502379 | NA | coding | downstream | 195599 | 92057562 ~ 92063708 (+) |
| borcs5 | LOC106561602 | coding | downstream | 203635 | 92065598 ~ 92072317 (+) |
| LOC110499798 | LOC106561603 | coding | downstream | 224351 | 92086314 ~ 92116411 (+) |
| G203559 | NA | non-coding | upstream | 7816 | 91853213 ~ 91853577 (+) |
| G203547 | NA | non-coding | upstream | 37597 | 91822319 ~ 91823796 (+) |
| G203503 | NA | non-coding | upstream | 92241 | 91768760 ~ 91769152 (+) |
| G203415 | NA | non-coding | upstream | 217371 | 91618362 ~ 91644022 (+) |
| G203281 | NA | non-coding | upstream | 447845 | 91412013 ~ 91413548 (+) |
| G203561 | NA | non-coding | downstream | 56907 | 91918870 ~ 91919819 (+) |
| G203629 | NA | non-coding | downstream | 128909 | 91990872 ~ 91993704 (+) |
| G203671 | NA | non-coding | downstream | 203297 | 92065260 ~ 92065481 (+) |
| G203674 | NA | non-coding | downstream | 212665 | 92074628 ~ 92074860 (+) |
| G203679 | NA | non-coding | downstream | 216759 | 92078722 ~ 92078933 (+) |
| G203551 | NA | other | upstream | 13993 | 91826849 ~ 91847400 (+) |
| G203438 | LOC106561592 | other | upstream | 189494 | 91668836 ~ 91671899 (+) |
| G203414 | NA | other | upstream | 237100 | 91622001 ~ 91624293 (+) |
| G203646 | cpa2 | other | downstream | 159792 | 92021755 ~ 92024742 (+) |
| G204240 | ckap5 | other | downstream | 295312 | 92157275 ~ 92159903 (+) |
| G204593 | NA | other | downstream | 819383 | 92681346 ~ 92682355 (+) |
| LOC110499942 | LOC106561637 | other | downstream | 975461 | 92837196 ~ 92839440 (+) |
| G205404 | NA | other | downstream | 1509430 | 93371393 ~ 93388550 (+) |
