Gene
RNA
| Item | Value |
|---|---|
| gene id | G203679 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 92078722 ~ 92078933 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU230523 | True | 212 | lncRNA | 0.41 | 1 | 92078722 | 92078933 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| borcs5 | LOC106561602 | coding | upstream | 6405 | 92065598 ~ 92072317 (+) |
| LOC110502379 | NA | coding | upstream | 15014 | 92057562 ~ 92063708 (+) |
| smc1b | LOC106561601 | coding | upstream | 29492 | 92028434 ~ 92049230 (+) |
| LOC110502371 | LOC106561599 | coding | upstream | 70655 | 91937152 ~ 92008067 (+) |
| LOC110502363 | LOC106561595 | coding | upstream | 145368 | 91853852 ~ 91933354 (+) |
| LOC110499798 | LOC106561603 | coding | downstream | 7381 | 92086314 ~ 92116411 (+) |
| LOC110499816 | LOC106561604 | coding | downstream | 44127 | 92123060 ~ 92129748 (+) |
| LOC110499833 | LOC106561605 | coding | downstream | 60147 | 92139080 ~ 92151823 (+) |
| LOC110499877 | LOC106561610 | coding | downstream | 309176 | 92388109 ~ 92392385 (+) |
| LOC110499906 | LOC106561611 | coding | downstream | 375392 | 92454325 ~ 92460616 (+) |
| G203674 | NA | non-coding | upstream | 3862 | 92074628 ~ 92074860 (+) |
| G203671 | NA | non-coding | upstream | 13241 | 92065260 ~ 92065481 (+) |
| G203629 | NA | non-coding | upstream | 85018 | 91990872 ~ 91993704 (+) |
| G203561 | NA | non-coding | upstream | 158903 | 91918870 ~ 91919819 (+) |
| G203579 | NA | non-coding | upstream | 216759 | 91861393 ~ 91861963 (+) |
| G203697 | NA | non-coding | downstream | 20424 | 92099357 ~ 92099781 (+) |
| G204211 | NA | non-coding | downstream | 39289 | 92118222 ~ 92118699 (+) |
| G204214 | NA | non-coding | downstream | 42922 | 92121855 ~ 92122169 (+) |
| G204226 | NA | non-coding | downstream | 54084 | 92133017 ~ 92133229 (+) |
| G204239 | ckap5 | non-coding | downstream | 74467 | 92153400 ~ 92154538 (+) |
| G203646 | cpa2 | other | upstream | 53980 | 92021755 ~ 92024742 (+) |
| G203551 | NA | other | upstream | 231322 | 91826849 ~ 91847400 (+) |
| G203438 | LOC106561592 | other | upstream | 406823 | 91668836 ~ 91671899 (+) |
| G203414 | NA | other | upstream | 454429 | 91622001 ~ 91624293 (+) |
| mgat4c | LOC106561589 | other | upstream | 539349 | 91366282 ~ 91543765 (+) |
| G204240 | ckap5 | other | downstream | 78342 | 92157275 ~ 92159903 (+) |
| G204593 | NA | other | downstream | 602413 | 92681346 ~ 92682355 (+) |
| LOC110499942 | LOC106561637 | other | downstream | 758491 | 92837196 ~ 92839440 (+) |
| G205404 | NA | other | downstream | 1292460 | 93371393 ~ 93388550 (+) |
| G205482 | NA | other | downstream | 1322684 | 93401617 ~ 93402234 (+) |
