Item | Value |
---|---|
gene id | G203697 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 92099357 ~ 92099781 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU230542 | False | 279 | lncRNA | 0.59 | 2 | 92099357 | 92099781 |
TU230544 | False | 249 | lncRNA | 0.46 | 2 | 92099357 | 92099781 |
TU230545 | True | 307 | lncRNA | 0.54 | 3 | 92099357 | 92099781 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
borcs5 | LOC106561602 | coding | upstream | 27040 | 92065598 ~ 92072317 (+) |
LOC110502379 | NA | coding | upstream | 35649 | 92057562 ~ 92063708 (+) |
smc1b | LOC106561601 | coding | upstream | 50127 | 92028434 ~ 92049230 (+) |
LOC110502371 | LOC106561599 | coding | upstream | 91290 | 91937152 ~ 92008067 (+) |
LOC110502363 | LOC106561595 | coding | upstream | 166003 | 91853852 ~ 91933354 (+) |
LOC110499816 | LOC106561604 | coding | downstream | 23279 | 92123060 ~ 92129748 (+) |
LOC110499833 | LOC106561605 | coding | downstream | 39299 | 92139080 ~ 92151823 (+) |
LOC110499877 | LOC106561610 | coding | downstream | 288328 | 92388109 ~ 92392385 (+) |
LOC110499906 | LOC106561611 | coding | downstream | 354544 | 92454325 ~ 92460616 (+) |
LOC110502389 | LOC106561615 | coding | downstream | 416043 | 92515824 ~ 92680198 (+) |
G203679 | NA | non-coding | upstream | 20424 | 92078722 ~ 92078933 (+) |
G203674 | NA | non-coding | upstream | 24497 | 92074628 ~ 92074860 (+) |
G203671 | NA | non-coding | upstream | 33876 | 92065260 ~ 92065481 (+) |
G203629 | NA | non-coding | upstream | 105653 | 91990872 ~ 91993704 (+) |
G203561 | NA | non-coding | upstream | 179538 | 91918870 ~ 91919819 (+) |
G204211 | NA | non-coding | downstream | 18441 | 92118222 ~ 92118699 (+) |
G204214 | NA | non-coding | downstream | 22074 | 92121855 ~ 92122169 (+) |
G204226 | NA | non-coding | downstream | 33236 | 92133017 ~ 92133229 (+) |
G204239 | ckap5 | non-coding | downstream | 53619 | 92153400 ~ 92154538 (+) |
G204277 | NA | non-coding | downstream | 101643 | 92201424 ~ 92202395 (+) |
G203646 | cpa2 | other | upstream | 74615 | 92021755 ~ 92024742 (+) |
G203551 | NA | other | upstream | 251957 | 91826849 ~ 91847400 (+) |
G203438 | LOC106561592 | other | upstream | 427458 | 91668836 ~ 91671899 (+) |
G203414 | NA | other | upstream | 475064 | 91622001 ~ 91624293 (+) |
mgat4c | LOC106561589 | other | upstream | 559984 | 91366282 ~ 91543765 (+) |
G204240 | ckap5 | other | downstream | 57494 | 92157275 ~ 92159903 (+) |
G204593 | NA | other | downstream | 581565 | 92681346 ~ 92682355 (+) |
LOC110499942 | LOC106561637 | other | downstream | 737643 | 92837196 ~ 92839440 (+) |
G205404 | NA | other | downstream | 1271612 | 93371393 ~ 93388550 (+) |
G205482 | NA | other | downstream | 1301836 | 93401617 ~ 93402234 (+) |