G204279


Basic Information

Item Value
gene id G204279
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 92197951 ~ 92199885 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU231183
GAGGTAGGGGTAGTGAcggcagtagtaatagtagtaatagtagtagtagtggtaggggtaGTGAcggcagtagtaatggtagtagtagtaatagtagtggtagtggtagggatAGTGAcagcagtagtaatggtagtagtagtagtagtagtggtggggtagTGAcggcagtagtaatagtagtagtagtaatagtagtggtagtggtagggatAGTGAcagcagtagtaatggtagtagtagtagtagtagtggtggggtagTGAcggcagtagtaatagtagtagtagtaatagtagtagtagtggtacatAGTGTAGTTAACATGggctagcatccctgtggaacgttatcgacaccttgtagagtaatgccctgacgaattgaggctgatcAGAGGCCAAAATGgggcgcaactcaatattaggaaggtataaGTATCAACACGTTTTTTTCAAGCAACAGTACCAGTGCCAGTCTATACATTTTAAAGTTGTTTTGTGTTGGTAGCTTTTGCGGTTTGGCACTACAGGTGGTGCAGGAAAGAAAATAAGTATGTTTCAGCAAGCACACTTACTac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231183 True 580 lncRNA 0.42 4 92197951 92199885

Neighbor

gene id symbol gene type direction distance location
LOC110499841 LOC106561606 coding downstream 7579 92153384 ~ 92190372 (-)
LOC110499762 cbpa2 coding downstream 170178 92021755 ~ 92027773 (-)
lrrk2 lrrk2 coding downstream 360771 91780201 ~ 91837180 (-)
lrriq1 lrriq1 coding downstream 457122 91691853 ~ 91740829 (-)
alx1 LOC106561592 coding downstream 524221 91668397 ~ 91673730 (-)
LOC110502383 LOC106561607 coding upstream 10445 92210330 ~ 92228748 (-)
cry2 LOC106561609 coding upstream 33546 92233431 ~ 92265019 (-)
LOC110499897 LOC106573100 coding upstream 198169 92398054 ~ 92443838 (-)
LOC110499887 NA coding upstream 227758 92427643 ~ 92428734 (-)
LOC110499952 LOC106561617 coding upstream 669961 92869846 ~ 92881298 (-)
G204264 NA non-coding downstream 30761 92166948 ~ 92167190 (-)
G204225 NA non-coding downstream 65037 92132618 ~ 92132914 (-)
G204224 NA non-coding downstream 65869 92131867 ~ 92132082 (-)
G204218 NA non-coding downstream 75910 92121768 ~ 92122041 (-)
G204212 NA non-coding downstream 78812 92118882 ~ 92119139 (-)
G204288 NA non-coding upstream 7205 92207090 ~ 92207340 (-)
G204290 NA non-coding upstream 9420 92209305 ~ 92209566 (-)
G204379 NA non-coding upstream 55859 92255744 ~ 92307743 (-)
G204421 NA non-coding upstream 126712 92326597 ~ 92326823 (-)
G204547 NA non-coding upstream 196185 92396070 ~ 92397541 (-)
G204024 NA other downstream 409848 91787187 ~ 91788103 (-)
G203915 rassf9 other downstream 606902 91589212 ~ 91591049 (-)
G202279 NA other downstream 1756526 90377557 ~ 90441425 (-)
LOC110499346 vps4a other downstream 2588061 89606837 ~ 89609890 (-)
G198912 NA other downstream 4871482 87322139 ~ 87326469 (-)
G205192 NA other upstream 762159 92962044 ~ 92962934 (-)
G206742 LOC106561643 other upstream 2112539 94312424 ~ 94312774 (-)
G206744 LOC106561643 other upstream 2113505 94313390 ~ 94313918 (-)
G206750 NA other upstream 2128025 94327910 ~ 94328183 (-)

Expression


Co-expression Network