G204287


Basic Information

Item Value
gene id G204287
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 92209299 ~ 92209553 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU231193
tTATAATGTTACTGGGCCGAACAGTGGCGCTGTTTCCCCTAATGCAGATTCGATATTTAATATACACTTATAAACAAAGCTTTAGGTATAGCTAATAGCAACTACCTTCAATGTACTGTTGTTCTGGAGTAGGTTATAGAATCACATATTTTAAACTCACATTGAATGCCTTGAAATCAATCCAATATTACCCTTCAGTGTTGTCACCCCCAGCATCaaatagtattatattgtatctcTATGCTCTCCACAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231193 True 255 lncRNA 0.36 1 92209299 92209553

Neighbor

gene id symbol gene type direction distance location
LOC110499833 LOC106561605 coding upstream 57476 92139080 ~ 92151823 (+)
LOC110499816 LOC106561604 coding upstream 79551 92123060 ~ 92129748 (+)
LOC110499798 LOC106561603 coding upstream 92888 92086314 ~ 92116411 (+)
borcs5 LOC106561602 coding upstream 136982 92065598 ~ 92072317 (+)
LOC110502379 NA coding upstream 145591 92057562 ~ 92063708 (+)
LOC110499877 LOC106561610 coding downstream 178556 92388109 ~ 92392385 (+)
LOC110499906 LOC106561611 coding downstream 244772 92454325 ~ 92460616 (+)
LOC110502389 LOC106561615 coding downstream 306271 92515824 ~ 92680198 (+)
LOC118943603 NA coding downstream 432477 92642030 ~ 92643329 (+)
LOC118943605 NA coding downstream 455272 92664825 ~ 92669744 (+)
G204277 NA non-coding upstream 6904 92201424 ~ 92202395 (+)
G204239 ckap5 non-coding upstream 54761 92153400 ~ 92154538 (+)
G204226 NA non-coding upstream 76070 92133017 ~ 92133229 (+)
G204214 NA non-coding upstream 87130 92121855 ~ 92122169 (+)
G204211 NA non-coding upstream 90600 92118222 ~ 92118699 (+)
G204309 NA non-coding downstream 18524 92228077 ~ 92228341 (+)
G204312 NA non-coding downstream 22157 92231710 ~ 92231909 (+)
G204313 NA non-coding downstream 23739 92233292 ~ 92300447 (+)
G204427 NA non-coding downstream 120588 92330141 ~ 92443833 (+)
G204578 NA non-coding downstream 234604 92444157 ~ 92444434 (+)
G204240 ckap5 other upstream 49396 92157275 ~ 92159903 (+)
G203646 cpa2 other upstream 184557 92021755 ~ 92024742 (+)
G203551 NA other upstream 361899 91826849 ~ 91847400 (+)
G203438 LOC106561592 other upstream 537400 91668836 ~ 91671899 (+)
G203414 NA other upstream 585006 91622001 ~ 91624293 (+)
G204593 NA other downstream 471793 92681346 ~ 92682355 (+)
LOC110499942 LOC106561637 other downstream 627871 92837196 ~ 92839440 (+)
G205404 NA other downstream 1161840 93371393 ~ 93388550 (+)
G205482 NA other downstream 1192064 93401617 ~ 93402234 (+)
G205683 LOC106573085 other downstream 1586529 93796082 ~ 93798936 (+)

Expression


Co-expression Network