Gene
RNA
| Item | Value |
|---|---|
| gene id | G204578 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 92444157 ~ 92444434 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU231515 | True | 278 | lncRNA | 0.38 | 1 | 92444157 | 92444434 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499877 | LOC106561610 | coding | upstream | 51772 | 92388109 ~ 92392385 (+) |
| LOC110499833 | LOC106561605 | coding | upstream | 292334 | 92139080 ~ 92151823 (+) |
| LOC110499816 | LOC106561604 | coding | upstream | 314409 | 92123060 ~ 92129748 (+) |
| LOC110499798 | LOC106561603 | coding | upstream | 327746 | 92086314 ~ 92116411 (+) |
| borcs5 | LOC106561602 | coding | upstream | 371840 | 92065598 ~ 92072317 (+) |
| LOC110499906 | LOC106561611 | coding | downstream | 9891 | 92454325 ~ 92460616 (+) |
| LOC110502389 | LOC106561615 | coding | downstream | 71390 | 92515824 ~ 92680198 (+) |
| LOC118943603 | NA | coding | downstream | 197596 | 92642030 ~ 92643329 (+) |
| LOC118943605 | NA | coding | downstream | 220391 | 92664825 ~ 92669744 (+) |
| LOC110499936 | LOC106561616 | coding | downstream | 251748 | 92696182 ~ 92799984 (+) |
| G204427 | NA | non-coding | upstream | 324 | 92330141 ~ 92443833 (+) |
| G204313 | NA | non-coding | upstream | 143710 | 92233292 ~ 92300447 (+) |
| G204312 | NA | non-coding | upstream | 212248 | 92231710 ~ 92231909 (+) |
| G204309 | NA | non-coding | upstream | 215816 | 92228077 ~ 92228341 (+) |
| G204287 | NA | non-coding | upstream | 234604 | 92209299 ~ 92209553 (+) |
| G204598 | NA | non-coding | downstream | 26872 | 92471306 ~ 92471516 (+) |
| G204601 | NA | non-coding | downstream | 32568 | 92477002 ~ 92495492 (+) |
| G204674 | NA | non-coding | downstream | 169665 | 92614099 ~ 92614399 (+) |
| G204675 | NA | non-coding | downstream | 170919 | 92615353 ~ 92615552 (+) |
| G204683 | NA | non-coding | downstream | 179547 | 92623981 ~ 92624242 (+) |
| G204240 | ckap5 | other | upstream | 284254 | 92157275 ~ 92159903 (+) |
| G203646 | cpa2 | other | upstream | 419415 | 92021755 ~ 92024742 (+) |
| G203551 | NA | other | upstream | 596757 | 91826849 ~ 91847400 (+) |
| G203438 | LOC106561592 | other | upstream | 772258 | 91668836 ~ 91671899 (+) |
| G203414 | NA | other | upstream | 819864 | 91622001 ~ 91624293 (+) |
| G204593 | NA | other | downstream | 236912 | 92681346 ~ 92682355 (+) |
| LOC110499942 | LOC106561637 | other | downstream | 392990 | 92837196 ~ 92839440 (+) |
| G205404 | NA | other | downstream | 926959 | 93371393 ~ 93388550 (+) |
| G205482 | NA | other | downstream | 957183 | 93401617 ~ 93402234 (+) |
| G205683 | LOC106573085 | other | downstream | 1351648 | 93796082 ~ 93798936 (+) |
