Gene
RNA
| Item | Value |
|---|---|
| gene id | G204736 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 92469525 ~ 92469862 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: repetitive proline-rich cell wall protein 1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU231704 | True | 248 | lncRNA | 0.40 | 2 | 92469525 | 92469862 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499897 | LOC106573100 | coding | downstream | 29893 | 92398054 ~ 92443838 (-) |
| LOC110499887 | NA | coding | downstream | 40791 | 92427643 ~ 92428734 (-) |
| cry2 | LOC106561609 | coding | downstream | 204506 | 92233431 ~ 92265019 (-) |
| LOC110502383 | LOC106561607 | coding | downstream | 240777 | 92210330 ~ 92228748 (-) |
| LOC110533906 | NA | coding | downstream | 267494 | 92197336 ~ 92202031 (-) |
| LOC110499952 | LOC106561617 | coding | upstream | 399984 | 92869846 ~ 92881298 (-) |
| LOC110499968 | NA | coding | upstream | 617399 | 93087261 ~ 93090465 (-) |
| LOC118936876 | NA | coding | upstream | 706448 | 93176310 ~ 93199900 (-) |
| LOC110499982 | LOC106561633 | coding | upstream | 868035 | 93337897 ~ 93372952 (-) |
| LOC110499989 | LOC106573087 | coding | upstream | 1007199 | 93477061 ~ 93606905 (-) |
| G204728 | NA | non-coding | downstream | 5212 | 92464101 ~ 92464313 (-) |
| G204547 | NA | non-coding | downstream | 71984 | 92396070 ~ 92397541 (-) |
| G204421 | NA | non-coding | downstream | 142702 | 92326597 ~ 92326823 (-) |
| G204379 | NA | non-coding | downstream | 161782 | 92255744 ~ 92307743 (-) |
| G204738 | NA | non-coding | upstream | 5801 | 92475663 ~ 92480209 (-) |
| G204792 | NA | non-coding | upstream | 136156 | 92606018 ~ 92606777 (-) |
| G204793 | NA | non-coding | upstream | 137781 | 92607643 ~ 92607903 (-) |
| G204810 | NA | non-coding | upstream | 160316 | 92630178 ~ 92630724 (-) |
| G204813 | NA | non-coding | upstream | 163661 | 92633523 ~ 92634387 (-) |
| G204024 | NA | other | downstream | 681422 | 91787187 ~ 91788103 (-) |
| G203915 | rassf9 | other | downstream | 878476 | 91589212 ~ 91591049 (-) |
| G202279 | NA | other | downstream | 2028100 | 90377557 ~ 90441425 (-) |
| LOC110499346 | vps4a | other | downstream | 2859635 | 89606837 ~ 89609890 (-) |
| G205192 | NA | other | upstream | 492182 | 92962044 ~ 92962934 (-) |
| G206742 | LOC106561643 | other | upstream | 1842562 | 94312424 ~ 94312774 (-) |
| G206744 | LOC106561643 | other | upstream | 1843528 | 94313390 ~ 94313918 (-) |
| G206750 | NA | other | upstream | 1858048 | 94327910 ~ 94328183 (-) |
| G207244 | LOC100194703 | other | upstream | 2147053 | 94616915 ~ 94617232 (-) |
