G204686


Basic Information

Item Value
gene id G204686
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 92627754 ~ 92627976 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU231638
CTAAATCTCCTTGGCCTTTGTCAAAATTGGCCTTTACATAAAACGTTAGAGCTGTGTATTCAAACACCAACCATTGGATAATACAGTTCCTCTAATTCTTGTGAGAGAATCTTGTGCTCGGTCTCGGCCCTAGCTCTCTCATGCTCTGATAACCCTCTGAATATGAGAAGTCCCTTCTGGCCATGGcagtctttattgttttgaaacttctgtatgtgtaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231638 True 223 lncRNA 0.41 1 92627754 92627976

Neighbor

gene id symbol gene type direction distance location
LOC110499906 LOC106561611 coding upstream 167138 92454325 ~ 92460616 (+)
LOC110499877 LOC106561610 coding upstream 235369 92388109 ~ 92392385 (+)
LOC110499833 LOC106561605 coding upstream 475931 92139080 ~ 92151823 (+)
LOC110499816 LOC106561604 coding upstream 498006 92123060 ~ 92129748 (+)
LOC110499798 LOC106561603 coding upstream 511343 92086314 ~ 92116411 (+)
LOC118943603 NA coding downstream 14054 92642030 ~ 92643329 (+)
LOC118943605 NA coding downstream 36849 92664825 ~ 92669744 (+)
LOC110499936 LOC106561616 coding downstream 68206 92696182 ~ 92799984 (+)
LOC110499942 LOC106561637 coding downstream 209220 92837196 ~ 92839440 (+)
LOC110533914 LOC106561638 coding downstream 213816 92841792 ~ 92845806 (+)
G204683 NA non-coding upstream 3512 92623981 ~ 92624242 (+)
G204675 NA non-coding upstream 12202 92615353 ~ 92615552 (+)
G204674 NA non-coding upstream 13355 92614099 ~ 92614399 (+)
G204601 NA non-coding upstream 132262 92477002 ~ 92495492 (+)
G204598 NA non-coding upstream 156238 92471306 ~ 92471516 (+)
G204695 NA non-coding downstream 10960 92638936 ~ 92639151 (+)
G204701 NA non-coding downstream 21930 92649906 ~ 92650146 (+)
G204704 NA non-coding downstream 29062 92657038 ~ 92657246 (+)
G204591 NA non-coding downstream 54718 92682694 ~ 92683249 (+)
G204840 NA non-coding downstream 55869 92683845 ~ 92684139 (+)
G204240 ckap5 other upstream 467851 92157275 ~ 92159903 (+)
G203646 cpa2 other upstream 603012 92021755 ~ 92024742 (+)
G203551 NA other upstream 780354 91826849 ~ 91847400 (+)
G203438 LOC106561592 other upstream 955855 91668836 ~ 91671899 (+)
G203414 NA other upstream 1003461 91622001 ~ 91624293 (+)
G204593 NA other downstream 53370 92681346 ~ 92682355 (+)
G205404 NA other downstream 743417 93371393 ~ 93388550 (+)
G205482 NA other downstream 773641 93401617 ~ 93402234 (+)
G205683 LOC106573085 other downstream 1168106 93796082 ~ 93798936 (+)

Expression


Co-expression Network