Gene
RNA
| Item | Value |
|---|---|
| gene id | G204833 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 92671355 ~ 92671561 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| SH3 and multiple ankyrin repeat domains protein 2-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU231826 | True | 207 | lncRNA | 0.43 | 1 | 92671355 | 92671561 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499897 | LOC106573100 | coding | downstream | 231723 | 92398054 ~ 92443838 (-) |
| LOC110499887 | NA | coding | downstream | 242621 | 92427643 ~ 92428734 (-) |
| cry2 | LOC106561609 | coding | downstream | 406336 | 92233431 ~ 92265019 (-) |
| LOC110502383 | LOC106561607 | coding | downstream | 442607 | 92210330 ~ 92228748 (-) |
| LOC110533906 | NA | coding | downstream | 469324 | 92197336 ~ 92202031 (-) |
| LOC110499952 | LOC106561617 | coding | upstream | 198285 | 92869846 ~ 92881298 (-) |
| LOC110499968 | NA | coding | upstream | 415700 | 93087261 ~ 93090465 (-) |
| LOC118936876 | NA | coding | upstream | 504749 | 93176310 ~ 93199900 (-) |
| LOC110499982 | LOC106561633 | coding | upstream | 666336 | 93337897 ~ 93372952 (-) |
| LOC110499989 | LOC106573087 | coding | upstream | 805500 | 93477061 ~ 93606905 (-) |
| G204832 | NA | non-coding | downstream | 326 | 92670809 ~ 92671029 (-) |
| G204831 | NA | non-coding | downstream | 5115 | 92664788 ~ 92666240 (-) |
| G204829 | NA | non-coding | downstream | 6631 | 92664449 ~ 92664724 (-) |
| G204817 | NA | non-coding | downstream | 29668 | 92641487 ~ 92641687 (-) |
| G204813 | NA | non-coding | downstream | 36968 | 92633523 ~ 92634387 (-) |
| G204837 | NA | non-coding | upstream | 6024 | 92677585 ~ 92681179 (-) |
| G204838 | NA | non-coding | upstream | 11105 | 92682666 ~ 92683230 (-) |
| G204958 | NA | non-coding | upstream | 74984 | 92746545 ~ 92748161 (-) |
| G204987 | NA | non-coding | upstream | 124821 | 92796382 ~ 92796939 (-) |
| G205006 | NA | non-coding | upstream | 145536 | 92817097 ~ 92817325 (-) |
| G204024 | NA | other | downstream | 883252 | 91787187 ~ 91788103 (-) |
| G203915 | rassf9 | other | downstream | 1080306 | 91589212 ~ 91591049 (-) |
| G202279 | NA | other | downstream | 2229930 | 90377557 ~ 90441425 (-) |
| LOC110499346 | vps4a | other | downstream | 3061465 | 89606837 ~ 89609890 (-) |
| G205192 | NA | other | upstream | 290483 | 92962044 ~ 92962934 (-) |
| G206742 | LOC106561643 | other | upstream | 1640863 | 94312424 ~ 94312774 (-) |
| G206744 | LOC106561643 | other | upstream | 1641829 | 94313390 ~ 94313918 (-) |
| G206750 | NA | other | upstream | 1656349 | 94327910 ~ 94328183 (-) |
| G207244 | LOC100194703 | other | upstream | 1945354 | 94616915 ~ 94617232 (-) |
