G204837


Basic Information

Item Value
gene id G204837
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 92677585 ~ 92681179 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU231833
ttgccccactgtaggtctaGTCAGCTTCACTGTAATAGGTCTAGTCAGCTTCACTACTAGGTCTAGTCAGCTTCACTACTAGGTCCAGTCAGCTTCACTACTAGGTCCAGTCAACTGCAATACTAGGTCCAGTCAGCTTCTCTACTATGTCTAGTCAGCTTCTCTACTATGTCTAGTCAGCTTCTCTACTATGTCTAGTCAGCTTCTCTACTATGTCTAGTCAGCTTCTCTACTAAGTCTAGTCAGCTTCTCTACTATGTCTAGTCAGCTTCTCTACTATGTCTAGTCAGCTTCTCTACTATGTCTAGTCAGCTTCTCTACTATGTCTAGTCAGCTTCTCTACTATGTCTAGTCAGCTTCTCTACTATGTCTAGTCAGCTTCTCTACTATGTCTAGTCAGCTTCTCTACTACGTCTAGTCAGCTTCTCTACTAAGTCTAGTCAGCTTCACTATATATGACTAGTCAGCTTCACTACTATGTCTAGTCAGCTTCTCTACTACGTCTAGTCAGCTTCTCTACTACGTCTAGTCAGCTTCTCTACTATGTCTAGTCAGCTTCACTATATATGACTAGTCAGCTTCTCTACTACGTCTAGTCAGCTTCTCTACTATGTCTAGTCAGCTTCTCTACTATGTCTAGTCAGCTTCTCTACTAAGTCTAGTCAGCTTCTCTACTATGTCTAGTCAGCTTCTCTACTACGTCTAGTCAGCTTCTCTACTATGTCTAGTCAGCTTCTCTACTATGTCTAGTCAGCTTCTCTACTATGTCTAGTCAGCTTCACTATAATAGGTCTGTGCATGGCCTCAGTGCAATGTGCAGCTATCAACTCTACATCAGCAGTCCCATTCAGTGGTGTTTTTCTCTTGGTCAAGTAACATTTCCTATAGCAAATAGTGAAGACAGGTACAGCCCGAGTATCTTCATAGTATACATACATGATGCACAAACTATGCAAATATCAATTTATATCAGcttttaataattaataatttaaTAATTACAGAGGCTTAGTCAAAACATGTGACTATCAATTGCTAAAAGATTTCAAATATGCTCTATAGGAATATGGATTATAACACAATTAGTTATATCAATTTTAAAAATAGAGACTTGAAATCCTGTTACATGTATAATTATTCAcctggaaaataaaaataacatctaCTTGAAACAGAATGTATATTATATTGCTTCTTAACCATATTTCGCTGCTTTTCAGAAAACCTAACCACACCTCAGGGTTGATATGGCGACAACACAGATAGGAATATACCCTCATGATAAAAATCTCTACATCATCAAAAATACTGTGTTCCTTCCTGTTCCTGTGGTTCTTAACATAAGATCTCATCTCAAAGTGTGCCCTCAAGTCGAAAGATGGTCGGAGTCattaccatagaaatataattaattcTATATCTACGGTTTCTGTGGACTATTTCTACGGACTAGAACTTTAATGCTGTGATGTCATGCATATCAGTCATCAGACATATCAAGGTCAGTTTTCCCCCTATCAAACCAATAGATCCCACGCACATGTAGATTCGAAATAACCTTCCATAAATACTGTCATTGGGATTTTAGCTAGCACCCACATTCTTTTACTCGAGAAATTCAAATATCAAGAAGTTTAAACTGTTAAGATCCGGAATATTAACCCAACGCAAACTGAGTGGAAAATAAAACTTCAGCCCGTTTCAGACAAACTCAGTGGAAAGTGTAATAAACTACATTTTAAACTCATCCACATTATGATGAGTGAATTTCTGCCTTTTTGGACTTACTCGTGATAGTATGAAGAGATCCTGTCTCGAAAACATGGAGGGAAATGATGCTCAACTCAACTAAATATAAAGTTTTGAtctacatttggttgagttgtcaactaacatgaattcaatgtgaaatcaaccaaaaatgtaatgtcattggatttaggtaaaaAATACTAAATTCCTTTACGTTAATTACTTTTTTTCAATTCAAATCACTTTTctacgttgattcaacgtcatcacatttaattttggggttgaaatgacgtggaaacaacattgattcaaccagtttttggcCAGTGGGTTTTGAGCTTTGTGGATGCATACAAATGTCTTTctcatcaacaaaacaccatcATAGATGAAATACGTCTCTAATACTTAAATTATCATACACAAAAAGTAAACATTCCTACCAAATTGATTCCTAGTGGTATCTGCATCTCTCTTTGCTTGCCAAACAAGTTGATCTCTGCTCCTTCTGATACCAGGTTTAGTGTTTGTTCACCTACTTTTTCCCATATAAGTGCATTCTGATATCTGTCTTCAAAAACATCCTTACTCTGCAGTGTTGGGGTAAATTCcttttcaattcaggaagtaaactttAATTCCATTTCCAATTTTACACAACGCTTCTCGTTGCAAAAATTGTAGAATTAGAAATTTAGTTTACTTCCAGAGTCCGCAAAATGACGTTGAGTGAGCAGCACCGCAGAATCTGCGATGAGCAAGATGCAAGACTCCGCTCTCACACAGTATCTGTGCATGTGCTCTGGTTCGATTCATGCACTTACAACGTGGTAGCCACAggaccaaaacagcagagaagcTGAGTGTCGCAATCAAACTCTCTAAGTTGTCGCAtaaaattgacccactatgctgtttacgtTGTGCATCTACGTCATATCGCTGACCCTACCtttaattgaaatggaattgaccccattCATTCCTGATAGTGTCTTCAATCCTAAAGTCCTAAACATCAGTTCAGGGTATACAGTAATAACCTAATGTGATAATGTATGTATTATTCCTCTCAGAGGACATAGAAGACTGTGAAAGAAATCATGACGGTTGATGATAACGATTGGAAAGCCCTGACTGCCAGTGCCAAGCACTCTGCCATGTCATGTTCAGGAGACTACAGTAAGGGGAGCTGTTGGCACACAGTTCAGCTTCTTGTGGAAGACAGTATAATGATTTATGAACAATTTAATTTACATTTTCAGTACTGTGTTTAAAACCCTCAAGTAAACATGACCAGTAGTAAAACAGCTATTGAAATAAGGTTGAAGGGCAACAACTTTGCTACTGTACCAATTTAGAAATTATTTTAATCTTTGATTTCCTTTTCTGGGTATAAATGTCTGTGTCTGAGAATACACTGTATGGTCTCTCAAATCAACCTACAACCCAGTgaaaagggatagagagaaagctTATTTTCACAGGCAGAAGTgcacatacatactgtaaatgTTTTCCCCTTTTTCCTAAAAAGATATTCCCCGCATAATTTCTAAATGAGAAACAGTAGAATATGAAACCCCTACGAAGCTGGTTCTGGTTATGCATTTAAATTAGGTTGATTTCAGAAGTCCGTAAATCCCATAGCGATTAAGCTGCTGTTGTGTTTGATAGTGTAGTATATTCCATATCACAGCCACATCCCGTGTATctacttccttccttccttcctactgACAGAGCAGCTCTGCCTCACCTGGGACCACTCTATCCCACTCTGGGGGACCTTCTTGCTTATTCAGGAAACTGCAGTGC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106596489

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231833 True 3573 lncRNA 0.38 2 92677585 92681179

Neighbor

gene id symbol gene type direction distance location
LOC110499897 LOC106573100 coding downstream 237953 92398054 ~ 92443838 (-)
LOC110499887 NA coding downstream 248851 92427643 ~ 92428734 (-)
cry2 LOC106561609 coding downstream 412566 92233431 ~ 92265019 (-)
LOC110502383 LOC106561607 coding downstream 448837 92210330 ~ 92228748 (-)
LOC110533906 NA coding downstream 475554 92197336 ~ 92202031 (-)
LOC110499952 LOC106561617 coding upstream 188667 92869846 ~ 92881298 (-)
LOC110499968 NA coding upstream 406082 93087261 ~ 93090465 (-)
LOC118936876 NA coding upstream 495131 93176310 ~ 93199900 (-)
LOC110499982 LOC106561633 coding upstream 656718 93337897 ~ 93372952 (-)
LOC110499989 LOC106573087 coding upstream 795882 93477061 ~ 93606905 (-)
G204833 NA non-coding downstream 6024 92671355 ~ 92671561 (-)
G204832 NA non-coding downstream 6556 92670809 ~ 92671029 (-)
G204831 NA non-coding downstream 11345 92664788 ~ 92666240 (-)
G204829 NA non-coding downstream 12861 92664449 ~ 92664724 (-)
G204817 NA non-coding downstream 35898 92641487 ~ 92641687 (-)
G204838 NA non-coding upstream 1487 92682666 ~ 92683230 (-)
G204958 NA non-coding upstream 65366 92746545 ~ 92748161 (-)
G204987 NA non-coding upstream 115203 92796382 ~ 92796939 (-)
G205006 NA non-coding upstream 135918 92817097 ~ 92817325 (-)
G205079 LOC106561637 non-coding upstream 157488 92838667 ~ 92839690 (-)
G204024 NA other downstream 889482 91787187 ~ 91788103 (-)
G203915 rassf9 other downstream 1086536 91589212 ~ 91591049 (-)
G202279 NA other downstream 2236160 90377557 ~ 90441425 (-)
LOC110499346 vps4a other downstream 3067695 89606837 ~ 89609890 (-)
G205192 NA other upstream 280865 92962044 ~ 92962934 (-)
G206742 LOC106561643 other upstream 1631245 94312424 ~ 94312774 (-)
G206744 LOC106561643 other upstream 1632211 94313390 ~ 94313918 (-)
G206750 NA other upstream 1646731 94327910 ~ 94328183 (-)
G207244 LOC100194703 other upstream 1935736 94616915 ~ 94617232 (-)

Expression


Co-expression Network