Gene
RNA
| Item | Value |
|---|---|
| gene id | G204838 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 92682666 ~ 92683230 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU231834 | False | 565 | lncRNA | 0.38 | 1 | 92682666 | 92683230 |
| TU231835 | True | 529 | lncRNA | 0.40 | 1 | 92682702 | 92683230 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499897 | LOC106573100 | coding | downstream | 243034 | 92398054 ~ 92443838 (-) |
| LOC110499887 | NA | coding | downstream | 253932 | 92427643 ~ 92428734 (-) |
| cry2 | LOC106561609 | coding | downstream | 417647 | 92233431 ~ 92265019 (-) |
| LOC110502383 | LOC106561607 | coding | downstream | 453918 | 92210330 ~ 92228748 (-) |
| LOC110533906 | NA | coding | downstream | 480635 | 92197336 ~ 92202031 (-) |
| LOC110499952 | LOC106561617 | coding | upstream | 186616 | 92869846 ~ 92881298 (-) |
| LOC110499968 | NA | coding | upstream | 404031 | 93087261 ~ 93090465 (-) |
| LOC118936876 | NA | coding | upstream | 493080 | 93176310 ~ 93199900 (-) |
| LOC110499982 | LOC106561633 | coding | upstream | 654667 | 93337897 ~ 93372952 (-) |
| LOC110499989 | LOC106573087 | coding | upstream | 793831 | 93477061 ~ 93606905 (-) |
| G204837 | NA | non-coding | downstream | 1487 | 92677585 ~ 92681179 (-) |
| G204833 | NA | non-coding | downstream | 11105 | 92671355 ~ 92671561 (-) |
| G204832 | NA | non-coding | downstream | 11637 | 92670809 ~ 92671029 (-) |
| G204831 | NA | non-coding | downstream | 16426 | 92664788 ~ 92666240 (-) |
| G204829 | NA | non-coding | downstream | 17942 | 92664449 ~ 92664724 (-) |
| G204958 | NA | non-coding | upstream | 63315 | 92746545 ~ 92748161 (-) |
| G204987 | NA | non-coding | upstream | 113152 | 92796382 ~ 92796939 (-) |
| G205006 | NA | non-coding | upstream | 133867 | 92817097 ~ 92817325 (-) |
| G205079 | LOC106561637 | non-coding | upstream | 155437 | 92838667 ~ 92839690 (-) |
| G205084 | NA | non-coding | upstream | 164666 | 92847896 ~ 92848299 (-) |
| G204024 | NA | other | downstream | 894563 | 91787187 ~ 91788103 (-) |
| G203915 | rassf9 | other | downstream | 1091617 | 91589212 ~ 91591049 (-) |
| G202279 | NA | other | downstream | 2241241 | 90377557 ~ 90441425 (-) |
| LOC110499346 | vps4a | other | downstream | 3072776 | 89606837 ~ 89609890 (-) |
| G205192 | NA | other | upstream | 278814 | 92962044 ~ 92962934 (-) |
| G206742 | LOC106561643 | other | upstream | 1629194 | 94312424 ~ 94312774 (-) |
| G206744 | LOC106561643 | other | upstream | 1630160 | 94313390 ~ 94313918 (-) |
| G206750 | NA | other | upstream | 1644680 | 94327910 ~ 94328183 (-) |
| G207244 | LOC100194703 | other | upstream | 1933685 | 94616915 ~ 94617232 (-) |
