G204840


Basic Information

Item Value
gene id G204840
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 92683845 ~ 92684139 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU231840
ggaatgctttaccaacagtcttgaaggagttcccacacatgctgaacacttgttggctgcttttccttcactctgcggtccaactcatcccaaaccatctcaaatgcattgaggtcgggtgattgtggaggccaggtcatctgatgcagcactctccttcttggtcaaatagcccttacacagactggaggtgtgttgagtcattgtcttGGTGAAAAacaattatagtcccactaagcgcaaaccagatgggatggcaaatCCCTGCAGAATGTGGGatgagcaaagcaccccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231840 True 295 lncRNA 0.46 1 92683845 92684139

Neighbor

gene id symbol gene type direction distance location
LOC110502389 LOC106561615 coding upstream 3647 92515824 ~ 92680198 (+)
LOC118943605 NA coding upstream 14101 92664825 ~ 92669744 (+)
LOC118943603 NA coding upstream 40516 92642030 ~ 92643329 (+)
LOC110499906 LOC106561611 coding upstream 223229 92454325 ~ 92460616 (+)
LOC110499877 LOC106561610 coding upstream 291460 92388109 ~ 92392385 (+)
LOC110499936 LOC106561616 coding downstream 12043 92696182 ~ 92799984 (+)
LOC110499942 LOC106561637 coding downstream 153057 92837196 ~ 92839440 (+)
LOC110533914 LOC106561638 coding downstream 157653 92841792 ~ 92845806 (+)
trnap-ugg-3 NA coding downstream 350851 93034990 ~ 93035061 (+)
trnap-agg-3 NA coding downstream 354027 93038166 ~ 93038237 (+)
G204591 NA non-coding upstream 596 92682694 ~ 92683249 (+)
G204704 NA non-coding upstream 26599 92657038 ~ 92657246 (+)
G204701 NA non-coding upstream 33699 92649906 ~ 92650146 (+)
G204695 NA non-coding upstream 44694 92638936 ~ 92639151 (+)
G204686 NA non-coding upstream 55869 92627754 ~ 92627976 (+)
G204909 NA non-coding downstream 98278 92782417 ~ 92782902 (+)
G205028 NA non-coding downstream 161767 92845906 ~ 92846227 (+)
G205030 NA non-coding downstream 163387 92847526 ~ 92847726 (+)
G205034 NA non-coding downstream 168517 92852656 ~ 92852864 (+)
G204593 NA other upstream 1490 92681346 ~ 92682355 (+)
G204240 ckap5 other upstream 523942 92157275 ~ 92159903 (+)
G203646 cpa2 other upstream 659103 92021755 ~ 92024742 (+)
G203551 NA other upstream 836445 91826849 ~ 91847400 (+)
G203438 LOC106561592 other upstream 1011946 91668836 ~ 91671899 (+)
G205404 NA other downstream 687254 93371393 ~ 93388550 (+)
G205482 NA other downstream 717478 93401617 ~ 93402234 (+)
G205683 LOC106573085 other downstream 1111943 93796082 ~ 93798936 (+)
G205688 NA other downstream 1126221 93810360 ~ 93812169 (+)

Expression


Co-expression Network