G205079 (LOC106561637)



Basic Information


Item Value
gene id G205079
gene name LOC106561637
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 92838667 ~ 92839690 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU232099
ATGTAATTGAATGCGAACAGAACGTCTGAAGAGAAGTGGTTTTACTTGCTGCCCCTAGGGTGCAGTGTCCACTAATGAACAGAACCGATGATACACCTTGAAAATAAACCcaaaggctgcgtttacacaggcaaccCGATAATTCCTCAAAACTCTAGACTATTAGCCTAATTCTTAAATAAAAATCTAGACTGCCATGATGAATGAATCTTGAGTTATATAGACCAGTAGAAAAACAATGCAAAAGCAATTTTGAATGAAAATGTGTTTATGATATAAAAAGCAAATAAATTAACACCACAATGGTAATACACATACTATTTATCATTTGCAAACACTTTTACCCAAAGTAACGTACATCAGGATGCGACCCACAATCCTGGCCTGGCATGCATcaagctctaccaactgagtcacagAGGACAATATACCATTGATTGTACAAGTGCTTTTTTGTACATTGTATTATTGTGTAAATCCACATGCATCCTTCCAGACATCTTCCTATGAAATGGTCATCAAGAAAAATACAAGACATTAACTGCATGTACTTACGATAATGTGAGTTAACAATTAGTGTACAAAGATACATTATATTCGAGACACTGATCACTTTATTCACAGGACAGTATCATTATGCCGGTTTAAATGAGGGCAGGGGGAGCTTGTATCTCTCAGTCACCAGTCATGCTCTTCCCACAGTCCACGTGTCTGACAAGTGAGACTTGTCATCAAGCTCCCTGGAGATGGACACATCTCTATCTCCTCTGCCCTGTTTCCCTGTGAGTCTGAGGGCATTCTGCCTGTACCCCAGACTACTGTTGATCAACAGGTGAACCATGTCATGGTCCTCGTTGCCCAGGACCCTAGGCAGGAAGAGGGAGGCCTTCTCTGTCTTTCGGGTCTTCAGGCCCCGCCTTGGCTGGCCCTTTCCATTGATTGACACATACCACAGCCTCCCAGCGCTCACCCTTCGCCTACTTCCTGTTGAGGTGGAGTGTGGGGTTGTCCGGTAGCGGCGGGA

Function


NR:

description
fibroblast growth factor 3-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU232099 True 1024 lncRNA 0.43 1 92838667 92839690

Neighbor


gene id symbol gene type direction distance location
LOC110499897 LOC106573100 coding downstream 399035 92398054 ~ 92443838 (-)
LOC110499887 NA coding downstream 409933 92427643 ~ 92428734 (-)
cry2 LOC106561609 coding downstream 573648 92233431 ~ 92265019 (-)
LOC110502383 LOC106561607 coding downstream 609919 92210330 ~ 92228748 (-)
LOC110533906 NA coding downstream 636636 92197336 ~ 92202031 (-)
LOC110499952 LOC106561617 coding upstream 30156 92869846 ~ 92881298 (-)
LOC110499968 NA coding upstream 247571 93087261 ~ 93090465 (-)
LOC118936876 NA coding upstream 336620 93176310 ~ 93199900 (-)
LOC110499982 LOC106561633 coding upstream 498207 93337897 ~ 93372952 (-)
LOC110499989 LOC106573087 coding upstream 637371 93477061 ~ 93606905 (-)
G205006 NA non-coding downstream 21342 92817097 ~ 92817325 (-)
G204987 NA non-coding downstream 41728 92796382 ~ 92796939 (-)
G204958 NA non-coding downstream 90506 92746545 ~ 92748161 (-)
G204838 NA non-coding downstream 155437 92682666 ~ 92683230 (-)
G204837 NA non-coding downstream 157488 92677585 ~ 92681179 (-)
G205084 NA non-coding upstream 8206 92847896 ~ 92848299 (-)
G205085 NA non-coding upstream 8971 92848661 ~ 92848878 (-)
G205094 NA non-coding upstream 27053 92866743 ~ 92866960 (-)
G205100 NA non-coding upstream 36032 92875722 ~ 92876185 (-)
G205117 NA non-coding upstream 61190 92900880 ~ 92901083 (-)
G204024 NA other downstream 1050564 91787187 ~ 91788103 (-)
G203915 rassf9 other downstream 1247618 91589212 ~ 91591049 (-)
G202279 NA other downstream 2397242 90377557 ~ 90441425 (-)
LOC110499346 vps4a other downstream 3228777 89606837 ~ 89609890 (-)
G205192 NA other upstream 122354 92962044 ~ 92962934 (-)
G206742 LOC106561643 other upstream 1472734 94312424 ~ 94312774 (-)
G206744 LOC106561643 other upstream 1473700 94313390 ~ 94313918 (-)
G206750 NA other upstream 1488220 94327910 ~ 94328183 (-)
G207244 LOC100194703 other upstream 1777225 94616915 ~ 94617232 (-)

Expression



Co-expression Network