G205050



Basic Information


Item Value
gene id G205050
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 92882032 ~ 92882335 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU232069
caggctatgtgcacactgcccacaaaatgaggtggaaactgagcagcaattcctaacctcctgccaaatgtatgaccatattagagacacacatttccctcagattacacagacccacaaagaattcgaaaacaaatccaattttgataaactcccacatctattgggtgaaataccacagtgtgcaatcacagcagcaagaaaagagcaaccaaggaagaacaaacaccattggaaatacaacctatatttattttcccttttgtacttgaactatttgcacatctttatatagacactgtat

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU232069 True 304 lncRNA 0.50 1 92882032 92882335

Neighbor


gene id symbol gene type direction distance location
LOC110533914 LOC106561638 coding upstream 36226 92841792 ~ 92845806 (+)
LOC110499942 LOC106561637 coding upstream 42592 92837196 ~ 92839440 (+)
LOC110499936 LOC106561616 coding upstream 82048 92696182 ~ 92799984 (+)
LOC118943605 NA coding upstream 212288 92664825 ~ 92669744 (+)
LOC118943603 NA coding upstream 238703 92642030 ~ 92643329 (+)
trnap-ugg-3 NA coding downstream 152655 93034990 ~ 93035061 (+)
trnap-agg-3 NA coding downstream 155831 93038166 ~ 93038237 (+)
trnap-ugg-4 NA coding downstream 158382 93040717 ~ 93040788 (+)
trnap-ugg-5 NA coding downstream 167981 93050316 ~ 93050387 (+)
trnap-agg-4 NA coding downstream 171199 93053534 ~ 93053605 (+)
G205041 NA non-coding upstream 13728 92867882 ~ 92868304 (+)
G205034 NA non-coding upstream 29168 92852656 ~ 92852864 (+)
G205030 NA non-coding upstream 34306 92847526 ~ 92847726 (+)
G205028 NA non-coding upstream 35805 92845906 ~ 92846227 (+)
G205070 NA non-coding downstream 29064 92911399 ~ 92912151 (+)
G205132 NA non-coding downstream 40005 92922340 ~ 92922550 (+)
G205174 NA non-coding downstream 69646 92951981 ~ 92952552 (+)
G205175 NA non-coding downstream 70279 92952614 ~ 92952820 (+)
G205187 NA non-coding downstream 77930 92960265 ~ 92960560 (+)
G204593 NA other upstream 199677 92681346 ~ 92682355 (+)
G204240 ckap5 other upstream 722129 92157275 ~ 92159903 (+)
G203646 cpa2 other upstream 857290 92021755 ~ 92024742 (+)
G203551 NA other upstream 1034632 91826849 ~ 91847400 (+)
G205404 NA other downstream 489058 93371393 ~ 93388550 (+)
G205482 NA other downstream 519282 93401617 ~ 93402234 (+)
G205683 LOC106573085 other downstream 913747 93796082 ~ 93798936 (+)
G205688 NA other downstream 928025 93810360 ~ 93812169 (+)
G206285 NA other downstream 1058151 93940486 ~ 93941471 (+)

Expression



Co-expression Network