G205070


Basic Information

Item Value
gene id G205070
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 92911399 ~ 92912151 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU232089
ATTCTAGACAAACAATACCTTGGCAACATACAGTATGATTTGGAGACAATGTGCTGTGGTTTCCTAAAACTGGCAACATTCATTAAAATCATTCACTTCTAGGCACTTTCTGAAGAAAACAATGAGATGCATCTGTAAAAAACAATGAGATGcatctgaaaaaaaaaacatctcagtAGGACAGCAGGACACACCTCTGGGGGTAACAGCAGTGTTGGGTGTGACGCTTTACGTAATCAGATTACTTTAATGAGTAACGGAGTAAAGTAACATGTTTATAAAATTGGGTAATATTACTACAGTTACTTTGTCAAACAACACGTGCGTTACTTTCAGAATCACATCTCTACCGAGCGCGTGTTTCCATGACCCGATCTTGACTTTTTTTCCACATTTAATACTTGAGCGAGTGGAGAAAGGCTAGAAATGTATAAAGGGCACATCTTTGCCACTGATTTATTCTGTGATAGCAAAGTCCACAGAGGGCTTTCCCATCTAGTGGCAAGTGTGCcttctatacatctctatgggtcATTGTACGTGCATCTATAAACAGAATGTAGCAGATGTTTGGCTTACAGTGTATATGGCTAATTAAGCAGCCCATATGATAACTCCGCACTGGCACAGGAAAGCAACGCCGCAGACGAAAGGAGAAACTGGTGGCCAAATCTGAGTTAGTAATCAGCCTATCTTTGGCAGAGCCTTGCTGCCTCTGACAGTCAAAGAAAACGGTGAAATTGTGTGATTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU232089 True 753 lncRNA 0.41 1 92911399 92912151

Neighbor

gene id symbol gene type direction distance location
LOC110533914 LOC106561638 coding upstream 65593 92841792 ~ 92845806 (+)
LOC110499942 LOC106561637 coding upstream 71959 92837196 ~ 92839440 (+)
LOC110499936 LOC106561616 coding upstream 111415 92696182 ~ 92799984 (+)
LOC118943605 NA coding upstream 241655 92664825 ~ 92669744 (+)
LOC118943603 NA coding upstream 268070 92642030 ~ 92643329 (+)
trnap-ugg-3 NA coding downstream 122839 93034990 ~ 93035061 (+)
trnap-agg-3 NA coding downstream 126015 93038166 ~ 93038237 (+)
trnap-ugg-4 NA coding downstream 128566 93040717 ~ 93040788 (+)
trnap-ugg-5 NA coding downstream 138165 93050316 ~ 93050387 (+)
trnap-agg-4 NA coding downstream 141383 93053534 ~ 93053605 (+)
G205050 NA non-coding upstream 29064 92882032 ~ 92882335 (+)
G205041 NA non-coding upstream 43095 92867882 ~ 92868304 (+)
G205034 NA non-coding upstream 58535 92852656 ~ 92852864 (+)
G205030 NA non-coding upstream 63673 92847526 ~ 92847726 (+)
G205028 NA non-coding upstream 65172 92845906 ~ 92846227 (+)
G205132 NA non-coding downstream 10189 92922340 ~ 92922550 (+)
G205174 NA non-coding downstream 39830 92951981 ~ 92952552 (+)
G205175 NA non-coding downstream 40463 92952614 ~ 92952820 (+)
G205187 NA non-coding downstream 48114 92960265 ~ 92960560 (+)
G205190 NA non-coding downstream 50183 92962334 ~ 92962553 (+)
G204593 NA other upstream 229044 92681346 ~ 92682355 (+)
G204240 ckap5 other upstream 751496 92157275 ~ 92159903 (+)
G203646 cpa2 other upstream 886657 92021755 ~ 92024742 (+)
G203551 NA other upstream 1063999 91826849 ~ 91847400 (+)
G205404 NA other downstream 459242 93371393 ~ 93388550 (+)
G205482 NA other downstream 489466 93401617 ~ 93402234 (+)
G205683 LOC106573085 other downstream 883931 93796082 ~ 93798936 (+)
G205688 NA other downstream 898209 93810360 ~ 93812169 (+)
G206285 NA other downstream 1028335 93940486 ~ 93941471 (+)

Expression


Co-expression Network