G205946


Basic Information

Item Value
gene id G205946
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 93385989 ~ 93387209 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU233069
TGGACTATGGATTGAGCAGCGTTTAGATGTGCTACGGTGGTCTGTGTGTGcatgagcgagagcgagagagagagagagagagagagagagagagagagagagagagagagagagaggtggggccgAGTGCTGAGTCTGTAATGTAACCTGCTTGTTTAGTTAATGGCTGAGAACATTGGCCACACTGATAGTGGTCTGGGGTCACAGAGGTCATGGACGGACATCAGCTAATGAAGctcccctgcccctctctctctttcaatctctaaGTCCATCCATCTCTatgtcccctctctcTCCATCCATCTctatgtcccctctctctctctctccatccatatctgcccctctctctctctctccatcctattcccctctctccatccttatctatgtaccctctctctctctctctctctgtccatctctatgtccactctttttctctctgtccatctctatgttctcaatccctctccctcaatcaaatcaaaatcaaattaaatcaaatgtatttatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaatccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggcttggaaaaactccctagaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgtggggtggccagtcctcttctgcctgtgccgggtggagattataacagaacatggccaagatgttcaaatgttcataaatgaccagcatggtcaaataataataatcataggcagaactgttgaaactggagcagcagcacggccaggtggaatggggacagcaaggagtcatcatgtcaggtagtcctgaggcatggtcctagggctcaggtcctccgagagagagaaagaaagagagaaagagagaattagagagagcatacttaaattcacacaggacactggataggacaggagaagtactccagatataacaaactgaacctagccccccgacacataaactactgcagcataaatc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU233069 True 1041 lncRNA 0.47 2 93385989 93387209

Neighbor

gene id symbol gene type direction distance location
LOC110499982 LOC106561633 coding downstream 13037 93337897 ~ 93372952 (-)
LOC118936876 NA coding downstream 186089 93176310 ~ 93199900 (-)
LOC110499968 NA coding downstream 295524 93087261 ~ 93090465 (-)
LOC110499952 LOC106561617 coding downstream 504691 92869846 ~ 92881298 (-)
LOC110499897 LOC106573100 coding downstream 946357 92398054 ~ 92443838 (-)
LOC110499989 LOC106573087 coding upstream 89852 93477061 ~ 93606905 (-)
LOC110502409 LOC106561641 coding upstream 372434 93759643 ~ 93925168 (-)
LOC110499999 LOC106561640 coding upstream 547206 93934415 ~ 94085913 (-)
LOC118943611 NA coding upstream 550376 93937585 ~ 93940374 (-)
LOC110500006 LOC106561642 coding upstream 713739 94100948 ~ 94141288 (-)
G205932 NA non-coding downstream 69574 93316177 ~ 93316415 (-)
G205919 NA non-coding downstream 83186 93302124 ~ 93302803 (-)
G205839 NA non-coding downstream 121406 93169875 ~ 93264583 (-)
G205872 NA non-coding downstream 160923 93221568 ~ 93225066 (-)
G205873 NA non-coding downstream 161050 93221734 ~ 93224939 (-)
G205993 NA non-coding upstream 37494 93424703 ~ 93424920 (-)
G206010 NA non-coding upstream 58193 93445402 ~ 93446002 (-)
G206011 NA non-coding upstream 59598 93446807 ~ 93447084 (-)
G206012 NA non-coding upstream 63112 93450321 ~ 93450530 (-)
G206030 NA non-coding upstream 87224 93474433 ~ 93475406 (-)
G205192 NA other downstream 423055 92962044 ~ 92962934 (-)
G204024 NA other downstream 1597886 91787187 ~ 91788103 (-)
G203915 rassf9 other downstream 1794940 91589212 ~ 91591049 (-)
G202279 NA other downstream 2944564 90377557 ~ 90441425 (-)
G206742 LOC106561643 other upstream 925215 94312424 ~ 94312774 (-)
G206744 LOC106561643 other upstream 926181 94313390 ~ 94313918 (-)
G206750 NA other upstream 940701 94327910 ~ 94328183 (-)
G207244 LOC100194703 other upstream 1229706 94616915 ~ 94617232 (-)
G207249 NA other upstream 1242228 94629437 ~ 94629739 (-)

Expression


Co-expression Network