G205520


Basic Information

Item Value
gene id G205520
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 93471622 ~ 93471824 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU232607
GTGATGACCTGAGAGAATAGGAAGTTTAGTAGCActgtaattaattaattaaacccTGTCTTCCCTGCTCTTATGTtcttttctctttccctttcGGTCTTTGACACtcatacctctctccctaccttctctttcttcctctctgtttttataatgcatgccagatgtgcattgaagtatAGATTGAACTTACAattttaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU232607 True 203 lncRNA 0.32 1 93471622 93471824

Neighbor

gene id symbol gene type direction distance location
LOC110502396 LOC105018284 coding upstream 94717 93373307 ~ 93376905 (+)
LOC110499974 LOC106561627 coding upstream 136104 93270955 ~ 93335518 (+)
ric8a ric8a coding upstream 386737 93068836 ~ 93084885 (+)
trnap-agg-6 NA coding upstream 404237 93067314 ~ 93067385 (+)
trnap-ugg-6 NA coding upstream 407313 93064238 ~ 93064309 (+)
LOC118936880 NA coding downstream 151209 93623033 ~ 93624085 (+)
LOC118936881 NA coding downstream 244265 93716089 ~ 93721762 (+)
LOC110500011 LOC106561648 coding downstream 673839 94145663 ~ 94149467 (+)
dnm1l LOC106561645 coding downstream 678607 94150431 ~ 94172796 (+)
LOC110500081 NA coding downstream 792185 94264009 ~ 94268751 (+)
G205506 NA non-coding upstream 21017 93450179 ~ 93450605 (+)
G205486 NA non-coding upstream 61924 93409100 ~ 93409698 (+)
G205404 NA non-coding upstream 83072 93371393 ~ 93388550 (+)
G205405 NA non-coding upstream 133908 93337154 ~ 93337714 (+)
G205433 NA non-coding upstream 166451 93303657 ~ 93305171 (+)
G205523 NA non-coding downstream 4906 93476730 ~ 93477442 (+)
G205525 NA non-coding downstream 9130 93480954 ~ 93481155 (+)
G205533 NA non-coding downstream 20099 93491923 ~ 93492126 (+)
G205536 NA non-coding downstream 23889 93495713 ~ 93496054 (+)
G205542 NA non-coding downstream 33216 93505040 ~ 93505270 (+)
G205482 NA other upstream 69388 93401617 ~ 93402234 (+)
LOC110499942 LOC106561637 other upstream 633495 92837196 ~ 92839440 (+)
G204593 NA other upstream 789267 92681346 ~ 92682355 (+)
G204240 ckap5 other upstream 1311719 92157275 ~ 92159903 (+)
G205683 LOC106573085 other downstream 324258 93796082 ~ 93798936 (+)
G205688 NA other downstream 338536 93810360 ~ 93812169 (+)
G206285 NA other downstream 468662 93940486 ~ 93941471 (+)
G206389 LOC106561642 other downstream 629155 94100979 ~ 94101872 (+)
LOC110500139 LOC106561672 other downstream 930767 94391364 ~ 94437682 (+)

Expression


Co-expression Network