G205536


Basic Information

Item Value
gene id G205536
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 93495713 ~ 93496054 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU232623
ctattcactgctttagcacactctgccaacccggatgttctagctgtgtctgaatcctggcttaggaagaccaccaaaaattcagacattttaattccaaactacaacattttcagacaagatagaattgccaaagggggcggtgttgcaatctactgcaaagatagcctgcagagttctgtcctactatccaggtctgtacccaaacaatttgaacttctacttttaaaaatccacctctctaaaaacaagtctctcaccgttgcagcctgctatagaccaccctctgcccccagctgtgctctggacaccatatgtgaactgattgccccccatctatct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU232623 True 342 lncRNA 0.38 1 93495713 93496054

Neighbor

gene id symbol gene type direction distance location
LOC110502396 LOC105018284 coding upstream 118808 93373307 ~ 93376905 (+)
LOC110499974 LOC106561627 coding upstream 160195 93270955 ~ 93335518 (+)
ric8a ric8a coding upstream 410828 93068836 ~ 93084885 (+)
trnap-agg-6 NA coding upstream 428328 93067314 ~ 93067385 (+)
trnap-ugg-6 NA coding upstream 431404 93064238 ~ 93064309 (+)
LOC118936880 NA coding downstream 126979 93623033 ~ 93624085 (+)
LOC118936881 NA coding downstream 220035 93716089 ~ 93721762 (+)
LOC110500011 LOC106561648 coding downstream 649609 94145663 ~ 94149467 (+)
dnm1l LOC106561645 coding downstream 654377 94150431 ~ 94172796 (+)
LOC110500081 NA coding downstream 767955 94264009 ~ 94268751 (+)
G205533 NA non-coding upstream 3587 93491923 ~ 93492126 (+)
G205525 NA non-coding upstream 14558 93480954 ~ 93481155 (+)
G205523 NA non-coding upstream 18271 93476730 ~ 93477442 (+)
G205520 NA non-coding upstream 23889 93471622 ~ 93471824 (+)
G205506 NA non-coding upstream 45108 93450179 ~ 93450605 (+)
G205542 NA non-coding downstream 8986 93505040 ~ 93505270 (+)
G205561 NA non-coding downstream 42127 93538181 ~ 93576687 (+)
G205583 NA non-coding downstream 93987 93590041 ~ 93590507 (+)
G205586 NA non-coding downstream 97420 93593474 ~ 93593752 (+)
G205594 NA non-coding downstream 107186 93603240 ~ 93603515 (+)
G205482 NA other upstream 93479 93401617 ~ 93402234 (+)
G205404 NA other upstream 107163 93371393 ~ 93388550 (+)
LOC110499942 LOC106561637 other upstream 657586 92837196 ~ 92839440 (+)
G204593 NA other upstream 813358 92681346 ~ 92682355 (+)
G204240 ckap5 other upstream 1335810 92157275 ~ 92159903 (+)
G205683 LOC106573085 other downstream 300028 93796082 ~ 93798936 (+)
G205688 NA other downstream 314306 93810360 ~ 93812169 (+)
G206285 NA other downstream 444432 93940486 ~ 93941471 (+)
G206389 LOC106561642 other downstream 604925 94100979 ~ 94101872 (+)
LOC110500139 LOC106561672 other downstream 906537 94391364 ~ 94437682 (+)

Expression


Co-expression Network