XLOC_002144


Basic Information

Item Value
gene id XLOC_002144
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 24650863 ~ 24655184 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005897
AGTGAAGGCAGGGGACCCTGAGCCTCCAAATCCTGGGAAGGCAGGGTTTGGTCCAGGAGGAAGACCCGGGAACACAGATGGAGCTGTTGTCAATCCAAGGCCAAAAGGGGTGTGAGAGGGAGCACTAGAGTGAGCCAGGCCAGTATATACAGATGAGACAGGAGGAGTAGGAGTAGAGGGGGTGGAAATGGAAGACTGGGCGCCAGGGAAAGGAGACATTGCTGCAAAATGTGGAGCAGGGCTACTTCCAGACTGAGAGCCTAGAGCTGAGGGCAGGCTATGGAGACCTGCTATGCCAGCAGTGCCAGGTAAATTAGACTGTGGTGAGGGAGAACCATGGGCCATACCAACAGGTCGGGCAAGGACAGCAGAGTTAGGCATTACTAGAGAGCTAAGAGAAGGGGTGCCAGAGCGTGAGGGGCCTTTAAATGCAGAAGGGACAGGACTGTTGCTTCCACTACCTCCGCCATGCCGGGCCATGGAGCTGGTGTGCTGCTCATTAAAATAAGCTCCTGCAGGGCTACCAAGGGCGGCCTGGGAGGTGAGTCCAGGAGAGGGCTTAGGGCTACCAACACCCTGCATGCTGGGAACAGATTGTCCAGGGGCGAGAGCAGACATCCCTGAAGGTGTGTAACTACGAATAACTGAATGTGACTGCGTAGAGGGAGTGCCAGGGTACAAAAGTGCTGACTGGGAGTCAGAGGAAGGTGGGTAGCCCTTTTTTGAGGGTAAACCCATTGCTCCATGAGTATTCATGGAGTCACCAGTTGCCCTGGGAGTAGGTGTGATGCCACCAGAAGGTGTTTCTGAGCGAGGCGCATTGTGGAACGGAGAAGGTGGGATGCCTGTACTTGGCCCAGGTGTACTACATGGTGTTCCAGATGGTGTATGACTTTTGATGACAGAAGGGGTGTTTCTACCAGAAGGGGGCATACTGGGAAATGGAGAGGGAACTGGTGTAGTGTGGCCACTGGAGTTAGAGGCAACTTGGGGAGAGCCAATTGGAGGTCCTTTGATAACTGAGGGAGACGGGGCAGGAGTAGGGGAAGGGGTCACAGGGTTCTGGGATGGGACCATGCCAGGGAAAACTGGAGTGATTGGTGTAGTTGGCTGAGGCTGGGAGGTGACTGGTGTTGATGGAGTGGAGCCACGAGGAGAGATAGCAGGTGTGCCAGAGATGTTGGCTGTTGGGTTTTGACTGGCAGGTCGGCTgt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005897 True 1214 lncRNA 0.55 2 24650863 24655184

Neighbor

gene id symbol gene type direction distance location
XLOC_002142 slc46a3 coding upstream 9463 24627683 ~ 24641400 (+)
XLOC_002141 mtus2a coding upstream 28546 24504292 ~ 24622317 (+)
XLOC_002140 paxbp1 coding upstream 157540 24422017 ~ 24493323 (+)
XLOC_002139 NA coding upstream 238838 24404690 ~ 24412025 (+)
XLOC_002138 CT573163.1 coding upstream 252192 24397098 ~ 24398671 (+)
XLOC_002145 thsd1 coding downstream 29615 24684799 ~ 24686503 (+)
XLOC_002146 tpte coding downstream 35350 24690534 ~ 24707956 (+)
XLOC_002147 NA coding downstream 160120 24815304 ~ 24819159 (+)
XLOC_002148 NA coding downstream 179575 24834759 ~ 24835445 (+)
XLOC_002149 chordc1b coding downstream 549442 25204626 ~ 25213025 (+)
XLOC_002136 NA non-coding upstream 275703 24316853 ~ 24375160 (+)
XLOC_002137 CU467963.3 non-coding upstream 296997 24353750 ~ 24353866 (+)
XLOC_002135 NA non-coding upstream 553553 24097055 ~ 24097310 (+)
XLOC_002154 NA non-coding downstream 1032450 25687634 ~ 25702407 (+)
XLOC_002156 NA non-coding downstream 1107019 25762203 ~ 25765571 (+)
XLOC_002158 BX530083.1 non-coding downstream 1309100 25964284 ~ 25964399 (+)

Expression


Co-expression Network