Item | Value |
---|---|
gene id | G206563 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 93932287 ~ 93932778 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
Syndecan-4 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU233760 | True | 492 | lncRNA | 0.44 | 1 | 93932287 | 93932778 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110502409 | LOC106561641 | coding | downstream | 7119 | 93759643 ~ 93925168 (-) |
LOC110499989 | LOC106573087 | coding | downstream | 325382 | 93477061 ~ 93606905 (-) |
LOC110499982 | LOC106561633 | coding | downstream | 559335 | 93337897 ~ 93372952 (-) |
LOC118936876 | NA | coding | downstream | 732387 | 93176310 ~ 93199900 (-) |
LOC110499968 | NA | coding | downstream | 841822 | 93087261 ~ 93090465 (-) |
LOC110499999 | LOC106561640 | coding | upstream | 1637 | 93934415 ~ 94085913 (-) |
LOC118943611 | NA | coding | upstream | 4807 | 93937585 ~ 93940374 (-) |
LOC110500006 | LOC106561642 | coding | upstream | 168170 | 94100948 ~ 94141288 (-) |
LOC110500013 | LOC106561647 | coding | upstream | 239103 | 94171881 ~ 94180442 (-) |
LOC110500043 | LOC106561646 | coding | upstream | 251421 | 94184199 ~ 94221146 (-) |
G206249 | NA | non-coding | downstream | 50793 | 93879956 ~ 93881494 (-) |
G206247 | NA | non-coding | downstream | 53151 | 93878155 ~ 93879136 (-) |
G206235 | NA | non-coding | downstream | 80551 | 93850896 ~ 93851736 (-) |
G206215 | NA | non-coding | downstream | 111702 | 93820151 ~ 93820585 (-) |
G206192 | NA | non-coding | downstream | 173017 | 93759058 ~ 93759270 (-) |
G206564 | LOC106561640 | non-coding | upstream | 1642 | 93934420 ~ 94085891 (-) |
G206565 | NA | non-coding | upstream | 7699 | 93940477 ~ 93941489 (-) |
G206619 | NA | non-coding | upstream | 106282 | 94039060 ~ 94039523 (-) |
G206645 | NA | non-coding | upstream | 155562 | 94088340 ~ 94088677 (-) |
G206605 | NA | non-coding | upstream | 165458 | 94098236 ~ 94100426 (-) |
G205192 | NA | other | downstream | 969353 | 92962044 ~ 92962934 (-) |
LOC110499897 | LOC106573100 | other | downstream | 1492686 | 92398054 ~ 92443838 (-) |
G204024 | NA | other | downstream | 2144184 | 91787187 ~ 91788103 (-) |
G203915 | rassf9 | other | downstream | 2341238 | 91589212 ~ 91591049 (-) |
G202279 | NA | other | downstream | 3490862 | 90377557 ~ 90441425 (-) |
G206742 | LOC106561643 | other | upstream | 379646 | 94312424 ~ 94312774 (-) |
G206744 | LOC106561643 | other | upstream | 380612 | 94313390 ~ 94313918 (-) |
G206750 | NA | other | upstream | 395132 | 94327910 ~ 94328183 (-) |
G207244 | LOC100194703 | other | upstream | 684137 | 94616915 ~ 94617232 (-) |
G207249 | NA | other | upstream | 696659 | 94629437 ~ 94629739 (-) |