G206388


Basic Information

Item Value
gene id G206388
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 94098245 ~ 94100411 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU233544
AGTGATGCATTTTAATTACACAATATACATgttcaacacacacactgcttacaTGGGATCAATAGGAGAACGGTATTTAAAACAAATCAAGTCAATATCTCTGTCCATCTTGGTCTTCATCACTCCGGAGGGACCGAAGACATCATCCTGACTACACAGTCATCAACCTGGGACCCTATTTAAAACATCTCAGAGTAgcatactgccctaccaagcaaaaaaggcagtaactgctcatagcgTGGAACTGAGAAAAACAGCTTgaatttaccttggtttcacagtaactttatgaagttactgctaacatgacccccCCATTTCCtccaaaacacagagacaggatacttgtccacatcATTAAGCACGTATTTAACATAGCAAAAATGACAAACTAATTTACTGCCTTCTTGCTTGGTAGGGAACTATAGACTACTGATCAGCGTTTGACTTTTTTGACCGTAATTAATTAGATTATCTGGagagaggacctgatcctagaccagcactcctAATCTGAGATGCTTGATGAATACGGGACTCGGGTTTGACAGTTGAAATGAGTCTATGCTGTGTAAGATCTTTAAGCTATGTCATCATCGTTCACTTGCCACAGGCACTACTGTGACAGTTCCCGAGCAACAGTATCAGTGCAGTAAGCAGCAGCCGATAATAGAATACAGTCCCTCTGCTACACCGGCATGATTCAAACTAGCAGTAATaataacacaacatggtagactATAGCATAGCACAGGAGAACCAGCACTTCAGGGTAGCTAGGATGGAGataacagacctgggttcaattacTATTGGAAATCTTTCAAATACGGTGAGCATTTGCTTTAGCCTTCCTGGAGTGCGGGTGGGCGGGGCTTGCCATTTTGGGACTATCCTATTGGTTCTATTATGCCATGCAAGCTGAATCAAGCACAGCTTTAAAAAAATGCGTTATACAAAAGGTTTTGtgtaatttcagccagtagttttgaaagtagcgCTCGTGTGTACAACAACGGCACCCGTTTCGTAGAATATGTAACGAAAGCCAATTCGTAAAATATGTCCTGAATTCGTATGTGCTGAAGATCCCGATCAAGTGTTTTAAATAGTACTTGAACCCATGTCTGGAAAACAGCATATTGGAGAAAGGAAAGTGTTCACAACCTGTTATTAGTGGATGCAGAACATCAGCATCGCTCATGCAAATAAATTAGAGAAGGATAAAAATTACTCTAAGCTAAAAAATAAAATCAGCATGTATTTAAAAGTAAATAATACAGAGGCAGAAGACTTCATTCAGGAGCATTTTAAATATTAATGCATTTCAAACTATAGCTACAATTTCACAATAGTAATACAACAGTCAAGTCATTGTTCTGTAACGCATTCTTAAAATCAAACTAGTGAGGAGTGAACATTTAGCATCTTACAGCCATGGATCCTGATTAGGACTCTACTCTGTGATCTAAAGCAGCTGTATGTGTGAACTAACCAGGTCAGTGGCTAACATCTTCCTCTAAATACATTGGTACATTTTTTTGAACGatttatacagtatatgtcaAAAAAATCTGCACCCTGATGAATGTACCAATATCACCGTCACCATTAAAACAATCAAATGAAAGACCACTAGCTGCATTGGTGTTAAAAAGTACAAGAAACAGAAATGTCAAGTGACCAGCCATTATTCTATCTCTGAGGCATACATTCAAGTAAAACATTGATAACCAACCACTGAACATGACAAGAtggttatcccccccccccccccccccccccaaaaaaaatggtaTATGTTTGTTTATGGTCCTAACCTTTAAAAATCAGTTATTGGTGGCAGATTCGGTTCAAGTCAAAGTTAAAACAAACTAAAAACGATTTAAATCCAAAATATATCCCAGATATATCTCTTATACAGTGTCAGGATATACATGGTTGTGATCTTTTTAGAAAGGTGAAAAAGTGCTTCATTGGAGAACAGTCAGTCCACAgttatgttccaaatggcacctcatctcctacataatgcactacttctaaccagagcCTTATATAGATATATTAGTGGGCTATTGGTAAGTTATCTACTCTGGCTTACAGAGTATGATAATAAGCAACATTATGTTGGTGATGTTGCcagacctccctctctccccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU233544 True 2167 lncRNA 0.39 1 94098245 94100411

Neighbor

gene id symbol gene type direction distance location
LOC118936881 NA coding upstream 376483 93716089 ~ 93721762 (+)
LOC118936880 NA coding upstream 474160 93623033 ~ 93624085 (+)
LOC110502396 LOC105018284 coding upstream 721340 93373307 ~ 93376905 (+)
LOC110499974 LOC106561627 coding upstream 762727 93270955 ~ 93335518 (+)
ric8a ric8a coding upstream 1013360 93068836 ~ 93084885 (+)
LOC110500011 LOC106561648 coding downstream 45252 94145663 ~ 94149467 (+)
dnm1l LOC106561645 coding downstream 50020 94150431 ~ 94172796 (+)
LOC110500081 NA coding downstream 163598 94264009 ~ 94268751 (+)
zgc:136858 LOC106561644 coding downstream 170149 94270560 ~ 94300044 (+)
LOC110500101 LOC106561643 coding downstream 199758 94300169 ~ 94317655 (+)
G206377 NA non-coding upstream 14046 94083754 ~ 94084199 (+)
G206325 NA non-coding upstream 108126 93989443 ~ 93990119 (+)
G206284 LOC106561640 non-coding upstream 157922 93934433 ~ 93940323 (+)
G206276 NA non-coding upstream 169541 93928316 ~ 93928704 (+)
G205748 NA non-coding upstream 198718 93899218 ~ 93899527 (+)
G206418 NA non-coding downstream 43173 94143584 ~ 94143821 (+)
G206419 NA non-coding downstream 44048 94144459 ~ 94144932 (+)
G206421 NA non-coding downstream 57013 94157424 ~ 94158198 (+)
G206426 LOC106561647 non-coding downstream 73649 94174060 ~ 94177373 (+)
G206447 NA non-coding downstream 130693 94231104 ~ 94231961 (+)
G206285 NA other upstream 156774 93940486 ~ 93941471 (+)
G205688 NA other upstream 286076 93810360 ~ 93812169 (+)
G205683 LOC106573085 other upstream 299309 93796082 ~ 93798936 (+)
G205482 NA other upstream 696011 93401617 ~ 93402234 (+)
G205404 NA other upstream 709695 93371393 ~ 93388550 (+)
G206389 LOC106561642 other downstream 568 94100979 ~ 94101872 (+)
LOC110500139 LOC106561672 other downstream 302180 94391364 ~ 94437682 (+)
G206850 NA other downstream 456758 94557169 ~ 94562224 (+)
G206908 NA other downstream 531418 94631829 ~ 94632267 (+)
G206926 NA other downstream 605535 94705946 ~ 94706248 (+)

Expression


Co-expression Network