G206669


Basic Information

Item Value
gene id G206669
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 94132849 ~ 94134411 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU233917
gccgCCCCAGGTTTGTATGTGGGCCTATACACTGagtgacaaaacattaggaacaccttcctaatattgagttcgacctcagaacagcctcaattcctcCGGGCATGGACTCTCTAGTGtagaaagctttccacagggatgctggcccatgttgactccaatgtttccctcAGTTGTGTCAACTTGACTCGATGTCCTTCGGGTTGTGGAACATGCTTTATACACTTAGGAagctgttgagcttgaaaaacccggCAGCGTGGCAGTTCTTGacgcactcaaaccggtgcgcctggtacctactatcataccctgcTCTAAGGCACTTAGTTATTTTGTCTTGTCcgttcaccttctgaatggcacacatacagaaTACCTCTCAAGACTTAAACatcctcctttaacctgtctcctccccttcatctttaacctgtctcctccccttcatctttaacctgtctcctccccttcatctacactgattgaactgaatttaacaggtgacatcaatatgggatcatagcttttacctggtcagtctgtgtcatggaaagagcaggtgttcctaatgttttgtacactcagtgtatgttcccTTATCATCATGCAGGTTATTTACATTACACATACCCGTATCTGTAGGGACTGTCCCATTGGACAACTTAACCCAAGGCCATTGTTTCTGGCCTGAGGAAACATTGGTTAACCTCGTCAACAGTGATCAAGTGAGGATACAGAAGAGTGTTTTTAAAGTCTGTTCAGTTACAGTATAGTTATGTCAATCCACTGGTCACAGATGTTGCATGCCATTTCCTCTGACCTCTAAGGTGTTGTTTGTATTaaggtcaatgtgtgtgtgtgctggaggcATGACGTCTGTTCCACAGGGGTCATATGTACTAAAATGCGTACCCTACTGAATGCATGCCACTCGCTGTACTctgttgctttggataaaagcttctGCTAAGCTTGTGTTTGCCGAC
>TU233915
TGACTgaatctgagctcctagagtgtccGGCTCTCCTTTTCTTTACCAACTTTTGCTATGACAACAGCTTAGCCAACATAGTGCTTGTATAAAAGAAAATCATTAATTGAGAGAACTGtgttcctatatatatatatatatttttttacatttatttaactacacaatgacggcctaggaacagtgggttaactgccttgttcaggggcagaaggacagatttgtaccttgtcagctcgggggtttgaacttgcaaccttccggttactagtccaacgctctcaccactaggctaccatgccgCCCCAGGTTTGTATGTGGGCCTATACACTGagtgacaaaacattaggaacaccttcctaatattgagttcgacctcagaacagcctcaattcctcCGGGCATGGACTCTCTAGTGtagaaagctttccacagggatgctggcccatgttgactccaatgtttccctcAGTTGTGTCAACTTGACTCGATGTCCTTCGGGTTGTGGAACATGCTTTATACACTTAGGAagctgttgagcttgaaaaacccggCAGCGTGGCAGTTCTTGacgcactcaaaccggtgcgcctggtacctactatcataccctgcTCTAAGGCACTTAGTTATTTTGTCTTGTCcgttcaccttctgaatggcacacatacagaaTACCTCTCAAGACTTAAACatcctcctttaacctgtctcctccccttcacctttaacctgtctcctccccttcatctttaacctgtctcctccccttcacctttaacctgtctcctcccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU233917 False 989 lncRNA 0.45 3 94132849 94134112
TU233915 True 795 lncRNA 0.46 2 94133492 94134411

Neighbor

gene id symbol gene type direction distance location
LOC110499999 LOC106561640 coding downstream 46936 93934415 ~ 94085913 (-)
LOC118943611 NA coding downstream 192475 93937585 ~ 93940374 (-)
LOC110502409 LOC106561641 coding downstream 207681 93759643 ~ 93925168 (-)
LOC110499989 LOC106573087 coding downstream 525944 93477061 ~ 93606905 (-)
LOC110499982 LOC106561633 coding downstream 759897 93337897 ~ 93372952 (-)
LOC110500013 LOC106561647 coding upstream 37470 94171881 ~ 94180442 (-)
LOC110500043 LOC106561646 coding upstream 49788 94184199 ~ 94221146 (-)
LOC110500065 LOC106561650 coding upstream 87955 94222366 ~ 94229545 (-)
LOC110500060 tnni3 coding upstream 98323 94232734 ~ 94243566 (-)
LOC110500075 LOC106561651 coding upstream 117007 94251418 ~ 94258833 (-)
G206605 NA non-coding downstream 32423 94098236 ~ 94100426 (-)
G206645 NA non-coding downstream 44172 94088340 ~ 94088677 (-)
G206564 LOC106561640 non-coding downstream 46958 93934420 ~ 94085891 (-)
G206619 NA non-coding downstream 93326 94039060 ~ 94039523 (-)
G206565 NA non-coding downstream 191360 93940477 ~ 93941489 (-)
G206672 NA non-coding upstream 8333 94142744 ~ 94143233 (-)
G206673 NA non-coding upstream 9006 94143417 ~ 94143763 (-)
G206674 NA non-coding upstream 10045 94144456 ~ 94144779 (-)
G206722 NA non-coding upstream 138721 94273132 ~ 94273456 (-)
G205192 NA other downstream 1169915 92962044 ~ 92962934 (-)
LOC110499897 LOC106573100 other downstream 1693248 92398054 ~ 92443838 (-)
G204024 NA other downstream 2344746 91787187 ~ 91788103 (-)
G203915 rassf9 other downstream 2541800 91589212 ~ 91591049 (-)
G202279 NA other downstream 3691424 90377557 ~ 90441425 (-)
G206742 LOC106561643 other upstream 178013 94312424 ~ 94312774 (-)
G206744 LOC106561643 other upstream 178979 94313390 ~ 94313918 (-)
G206750 NA other upstream 193499 94327910 ~ 94328183 (-)
G207244 LOC100194703 other upstream 482504 94616915 ~ 94617232 (-)
G207249 NA other upstream 495026 94629437 ~ 94629739 (-)

Expression


Co-expression Network