Gene
RNA
| Item | Value |
|---|---|
| gene id | G206742 |
| gene name | LOC106561643 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 94312424 ~ 94312774 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| CCR4-NOT transcription complex subunit 4-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU234006 | False | 351 | TUCP | 0.52 | 1 | 94312424 | 94312774 |
| TU234005 | True | 248 | TUCP | 0.43 | 1 | 94312527 | 94312774 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500075 | LOC106561651 | coding | downstream | 53591 | 94251418 ~ 94258833 (-) |
| LOC110500060 | tnni3 | coding | downstream | 68858 | 94232734 ~ 94243566 (-) |
| LOC110500065 | LOC106561650 | coding | downstream | 82879 | 94222366 ~ 94229545 (-) |
| LOC110500043 | LOC106561646 | coding | downstream | 91278 | 94184199 ~ 94221146 (-) |
| LOC110500013 | LOC106561647 | coding | downstream | 131982 | 94171881 ~ 94180442 (-) |
| LOC110500125 | LOC106561674 | coding | upstream | 35744 | 94348518 ~ 94359922 (-) |
| LOC110500132 | LOC106561675 | coding | upstream | 51241 | 94364015 ~ 94367194 (-) |
| LOC110500153 | LOC106561673 | coding | upstream | 99470 | 94412244 ~ 94417008 (-) |
| LOC110500221 | LOC106561669 | coding | upstream | 213774 | 94526548 ~ 94529608 (-) |
| asb13b | LOC106561665 | coding | upstream | 291270 | 94604044 ~ 94611792 (-) |
| G206741 | NA | non-coding | downstream | 254 | 94311888 ~ 94312170 (-) |
| G206738 | LOC106561643 | non-coding | downstream | 3232 | 94308970 ~ 94309192 (-) |
| G206737 | NA | non-coding | downstream | 3917 | 94308154 ~ 94308507 (-) |
| G206725 | NA | non-coding | downstream | 21137 | 94284127 ~ 94291287 (-) |
| G206722 | NA | non-coding | downstream | 38968 | 94273132 ~ 94273456 (-) |
| G206745 | LOC106561643 | non-coding | upstream | 1566 | 94314340 ~ 94314585 (-) |
| G206743 | LOC106561643 | non-coding | upstream | 2292 | 94315066 ~ 94317648 (-) |
| G206748 | NA | non-coding | upstream | 8948 | 94321722 ~ 94322292 (-) |
| G206751 | NA | non-coding | upstream | 16327 | 94329101 ~ 94329351 (-) |
| G206756 | NA | non-coding | upstream | 25256 | 94338030 ~ 94338266 (-) |
| G205192 | NA | other | downstream | 1349490 | 92962044 ~ 92962934 (-) |
| LOC110499897 | LOC106573100 | other | downstream | 1872823 | 92398054 ~ 92443838 (-) |
| G204024 | NA | other | downstream | 2524321 | 91787187 ~ 91788103 (-) |
| G203915 | rassf9 | other | downstream | 2721375 | 91589212 ~ 91591049 (-) |
| G202279 | NA | other | downstream | 3870999 | 90377557 ~ 90441425 (-) |
| G206744 | LOC106561643 | other | upstream | 616 | 94313390 ~ 94313918 (-) |
| G206750 | NA | other | upstream | 15136 | 94327910 ~ 94328183 (-) |
| G207244 | LOC100194703 | other | upstream | 304141 | 94616915 ~ 94617232 (-) |
| G207249 | NA | other | upstream | 316663 | 94629437 ~ 94629739 (-) |
| G207340 | LOC105021815 | other | upstream | 449888 | 94762662 ~ 94776356 (-) |
