G206744 (LOC106561643)


Basic Information

Item Value
gene id G206744
gene name LOC106561643
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 94313390 ~ 94313918 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU234008
GGGATCCCTCCCAGCCCTGTACTGTGGCGCTGAGGAGGCATGCTCAAGTCCAGGAAGTTTCCGTGTCCCCCTCCAGCGTTGGCCAAGTGGTTCAAGTGTGAGAGGTGATTATTGTTGCGTGCCGAGGGAGACATGTCCATCCAGGGATGCCGAGAGGCTGTGGCGGCCTGGGCAGCCTGACTGCCACCATGATGACTACTCTGACTCTGGGAACCAGGGAAACTAAAAGAACTATAGATTTGCCTGTGGTGGAGCTGAGAGAGGCGGGGTGGAGGTCCAAGGCTACTGGGGAAATGGTTGGGGTTGGAGGGGGGCAGGTGAAGGCCGTGGTGGGACCCGGGGTGGTGGAGGCTGAAGGGGCCGGGGGACCCCAGCGGACTGGGCTGGTCCTGGACTGACAGCTCCTTCTCTATGAGGTCAGCCAGGGCCTTCCTCGTGATGTCGAAGGGGTCGAAGCCTAGGTCGTCGTCCTGCTGTTGTGTCTTGGATGAGGAGCCGAAGCCGAAGGCCGCCTGCCAGTCTGTGGAGG

Function

NR:

description
CCR4-NOT transcription complex subunit 4-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU234008 True 529 TUCP 0.47 1 94313390 94313918

Neighbor

gene id symbol gene type direction distance location
LOC110500075 LOC106561651 coding downstream 54557 94251418 ~ 94258833 (-)
LOC110500060 tnni3 coding downstream 69824 94232734 ~ 94243566 (-)
LOC110500065 LOC106561650 coding downstream 83845 94222366 ~ 94229545 (-)
LOC110500043 LOC106561646 coding downstream 92244 94184199 ~ 94221146 (-)
LOC110500013 LOC106561647 coding downstream 132948 94171881 ~ 94180442 (-)
LOC110500125 LOC106561674 coding upstream 34600 94348518 ~ 94359922 (-)
LOC110500132 LOC106561675 coding upstream 50097 94364015 ~ 94367194 (-)
LOC110500153 LOC106561673 coding upstream 98326 94412244 ~ 94417008 (-)
LOC110500221 LOC106561669 coding upstream 212630 94526548 ~ 94529608 (-)
asb13b LOC106561665 coding upstream 290126 94604044 ~ 94611792 (-)
G206741 NA non-coding downstream 1220 94311888 ~ 94312170 (-)
G206738 LOC106561643 non-coding downstream 4198 94308970 ~ 94309192 (-)
G206737 NA non-coding downstream 4883 94308154 ~ 94308507 (-)
G206725 NA non-coding downstream 22103 94284127 ~ 94291287 (-)
G206722 NA non-coding downstream 39934 94273132 ~ 94273456 (-)
G206745 LOC106561643 non-coding upstream 422 94314340 ~ 94314585 (-)
G206743 LOC106561643 non-coding upstream 1148 94315066 ~ 94317648 (-)
G206748 NA non-coding upstream 7804 94321722 ~ 94322292 (-)
G206751 NA non-coding upstream 15183 94329101 ~ 94329351 (-)
G206756 NA non-coding upstream 24112 94338030 ~ 94338266 (-)
G206742 LOC106561643 other downstream 616 94312424 ~ 94312774 (-)
G205192 NA other downstream 1350456 92962044 ~ 92962934 (-)
LOC110499897 LOC106573100 other downstream 1873789 92398054 ~ 92443838 (-)
G204024 NA other downstream 2525287 91787187 ~ 91788103 (-)
G203915 rassf9 other downstream 2722341 91589212 ~ 91591049 (-)
G206750 NA other upstream 13992 94327910 ~ 94328183 (-)
G207244 LOC100194703 other upstream 302997 94616915 ~ 94617232 (-)
G207249 NA other upstream 315519 94629437 ~ 94629739 (-)
G207340 LOC105021815 other upstream 448744 94762662 ~ 94776356 (-)
G207858 LOC106561692 other upstream 1063805 95377723 ~ 95408714 (-)

Expression


Co-expression Network