G206843 (lap2b)


Basic Information

Item Value
gene id G206843
gene name lap2b
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 94501893 ~ 94504156 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU234111
CATGATAGTATTTTAAATAAAAACAGATTCAAAATCCTTACCCCCACAATCCATCGTTGGGAAGCTAGCTGCCTGATCAAAGTAACaaacatttcagctttaataTACTGTATTCACTGTGTAACCACAAGTCAACAAAGAGGTTCAGTTTTAGGATagcattttttgtttgttttttaaaatttcacTTTCACCTAGACAAAAGAACAACATTAACAATAAAAAATGTCAACATCTTGACATCAAAATTCTATGAATGGTCAACATAAGTTAAGTTGCTATCAATTTGTTAAGTTGCTTACCATTTGTCTCTCCTCAGGCAATTGTTAGTGTTACCTCTTCTATGACAATGAAGTGTACATGAGGCAGAGTAAATATCAATTTATAATCCAAGTAACAAAATGGAATACATTGTTAACTCGTATATTTGCTCAACTACCTATTGCAAAAACGTTATTTTTCCCAGATCAGTAGTGTGCAGAACCGCTTAGAAGGGCAGTGTGGGTGCACTAAAAAAGACAGCCAGTCTTGGGTCATGTTCCTTAGGCAACAAACAGGGAAAACACACATTAAAACAGAGAGGATTATACCCATTTTGCTACagtgccctactgaacatgacccggTAGATGGGACTGGAAGATCTGGAATCTTTAGCACAACAAATCACTACTAAATGAAACATGTACGTAAACTCACACAAACTCACAAAGCTAATACTGGGATTTGGGTCACTGCTCCTCAAGTCAGGTGCCATCATGAGCCATTCACAGGTCAGACCACTTACTTAGTTACTGCAGCATATACCAAAAAACGAGCAATTTAACCAAAGAAAATCAGTTTTATAACCTTTATAGCTTGAAAATAAGGGTTTTTCCTCATACAGTGACGAGACCTGAAGTTACACTATTGGACACTGTCACTCCTCCCAGCACTGATCAGATTAATTTAGAGCAAATTAGAATAGACCTGAGCACCATTATTCTACCTAGCTTTATTGTTACTACTAGTGTATATTCAAAAACCAATACATTAATATCATTTCTCTGTGCTTGAATTAGTGGGAGGGCACTAAGCAGGGTTGAGGTAAATTCCATGTCAATTCCAGTcgattcaggaagtacactggaATTCCAATTCTCTTCCATGCTTTTTAATGAGGAACATTTGGAattgtttactttctgaattgactggaattgaaatggaattgacaccTACACTGGCACTAAGTGCTATCACTGTGCATGCACTTCACCATCAGAAAAACACCTGGCACCACAGACACTCCAAAAACGACAAACATGTCCTTCAAAAAACTACAACCATGCGTACGATTTGTCTGTCCTTtctaaaaatacacacacaaaggATACACAACATAAGACTTCACACTACGATTAAAAACAACGTCATAATAAAAACAAGTCTCTTTAGACTGTCTTGGCAAGACAGTGTTGGTTTTCCAGGAAGCTGGTGTTGGTTGGGTTGAATACCCCTCCTGCCCTCCTCACGTGGGGTGAGGAAAAGTGAACAAGGAGGGGACAGGATGATAGTCTACCAGCCCAGATTAAAAGTCAGTCCGTCCTCCAAGGTAGTGACCAGAGGATGACGATGGAGGGGGGTGTGGTGAGCTAGTGAGGTGTGGATGGCAGAGCAGTGGCCAGGTGGTCTGTTGAATAACCGGGGATCTGACCTCAATTGGacaacctggtaaaataacggtaaaataatacaacaaaaaaagaaagcaGGGTGGAGAGGGTGCACTGCTTACCGGCCGCCACTCTCTGCTTCTGCACCTTGGCTGCTGCCTCCCCCGATACCCAGCGGCACAATCACATTATCGAACACGGCATCCACCACCTTATCAACCGCGCTACACAGGTGACCCTTAGCGCTGTTTAGGAGACCCTTGGCGTCGGTCAGCATTCCCTTGAAGGACTGAACCTGATCTGCATCGAGGTGCTGAATGGCGAAGTAGATGGACCCAGCTACAGTGACGAGTACCATGAGCTTTAATAGTACAGAGAGGAAGCCGGGCCTGGCCGGCACGTTGGAGCCCAAGGAGCTGCATCCAGAATAAGACTCTGTATAGATGGAGTGCTCCAGGAGAGACTCGTTCAGCCAGTAGTTGCTGGGTTTCACCGGTCGGCCCGCCGCGCCGCGAATCGGTCGCCTGCAG

Function

NR:

description
lamina-associated polypeptide 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU234111 True 2185 lncRNA 0.43 3 94501893 94504156

Neighbor

gene id symbol gene type direction distance location
LOC110500153 LOC106561673 coding downstream 84885 94412244 ~ 94417008 (-)
LOC110500132 LOC106561675 coding downstream 134699 94364015 ~ 94367194 (-)
LOC110500125 LOC106561674 coding downstream 141971 94348518 ~ 94359922 (-)
LOC110500075 LOC106561651 coding downstream 243060 94251418 ~ 94258833 (-)
LOC110500060 tnni3 coding downstream 258327 94232734 ~ 94243566 (-)
LOC110500221 LOC106561669 coding upstream 22392 94526548 ~ 94529608 (-)
asb13b LOC106561665 coding upstream 99888 94604044 ~ 94611792 (-)
LOC110500283 gdi2 coding upstream 161772 94665928 ~ 94686821 (-)
LOC110500320 LOC106604557 coding upstream 273402 94777558 ~ 94781368 (-)
LOC110500345 LOC106561680 coding upstream 455762 94959918 ~ 94974913 (-)
G206839 lap2b non-coding downstream 2078 94498987 ~ 94499815 (-)
G206834 NA non-coding downstream 11197 94490408 ~ 94490696 (-)
G206830 NA non-coding downstream 15090 94486525 ~ 94486803 (-)
G206827 NA non-coding downstream 19201 94482394 ~ 94482692 (-)
G206773 NA non-coding downstream 116540 94385118 ~ 94385353 (-)
G207192 LOC106561670 non-coding upstream 13420 94517576 ~ 94518231 (-)
G207194 NA non-coding upstream 17931 94522087 ~ 94522967 (-)
G207205 NA non-coding upstream 51368 94555524 ~ 94555822 (-)
G207225 NA non-coding upstream 77042 94581198 ~ 94581807 (-)
G207226 NA non-coding upstream 77768 94581924 ~ 94582416 (-)
G206750 NA other downstream 173710 94327910 ~ 94328183 (-)
G206744 LOC106561643 other downstream 187975 94313390 ~ 94313918 (-)
G206742 LOC106561643 other downstream 189119 94312424 ~ 94312774 (-)
G205192 NA other downstream 1538959 92962044 ~ 92962934 (-)
LOC110499897 LOC106573100 other downstream 2062292 92398054 ~ 92443838 (-)
G207244 LOC100194703 other upstream 112759 94616915 ~ 94617232 (-)
G207249 NA other upstream 125281 94629437 ~ 94629739 (-)
G207340 LOC105021815 other upstream 258506 94762662 ~ 94776356 (-)
G207858 LOC106561692 other upstream 873567 95377723 ~ 95408714 (-)
G207959 NA other upstream 1019812 95523968 ~ 95524227 (-)

Expression


Co-expression Network