G206851 (LOC105030512)


Basic Information

Item Value
gene id G206851
gene name LOC105030512
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 94562973 ~ 94563894 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU234121
TAGTGAACTTCAGGTATCCTGTAAATTATTTGTAGAGAATTTTCAGCCTCTTCGGAGTTTGTTGAATTAGCCTTTTTTTGTTGCTACGTTTCAATCTTATCGAATGTAAGATTTAGGTTGCCTGCTAAAATAATAGTTTCTGTCTGGATTTGATCTAATATAGTTTGAATTCAATCTAAAAAACACACCAGATTTGCCCCTGGTaggatataaactcagcaaaaaaaagaaatatccctttttcaggaccctgtctctcaaagataattcgtaaaaatccaaataacttcacagattttcattgtaaagggtttaaacactttcTCATGCTAGTTAAAtcaaccataaacaatgaatgaacatgcacctgtggaacggtcgttaagacactaacagcttacagacagtaggcaattaaggtcacagttatgaaaacgtaggacactaaagaggtctttctactgacatctgcgtgaacgtgccttaggcatgctgcaaggggtcatgaggactgcagatgtggtcagggtaataaattgcaatgtccgtactgtaagatggcgctacagggagacaagaccgagagctgatcatcctcgcagtggcagaccacgtgtaacaacacctgcacaggatcggtacatccgaacatcacacctgcgggacaggtacaggaaggcaacaacaactgcccgagttggaccaggaacgcacaatccctccatcagtgctcagactgtccgcaataggctgaggctggactgagggcttgtaggcctgttgtaaggcaggtcctcaccagacatcaccggcaacaacgttgcctatgggcacaaacccactgtcgctggaccagacaggactggcaaaaagtgctcttcactgacgagtcgcggttttgtctctcCAGAGGTGATGGGCG

Function

NR:

description
PREDICTED: uncharacterized protein LOC105030512

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU234121 True 922 lncRNA 0.45 1 94562973 94563894

Neighbor

gene id symbol gene type direction distance location
LOC110500196 LOC106561667 coding upstream 6588 94539657 ~ 94556385 (+)
LOC110500215 LOC106561668 coding upstream 21011 94529641 ~ 94541962 (+)
LOC110500186 LOC106561670 coding upstream 42832 94514561 ~ 94520141 (+)
LOC110500174 LOC106561671 coding upstream 49226 94505382 ~ 94513747 (+)
LOC118944176 NA coding upstream 50125 94512606 ~ 94512848 (+)
LOC110500230 LOC106561666 coding downstream 24641 94588535 ~ 94602636 (+)
LOC110500246 NA coding downstream 74237 94638131 ~ 94665869 (+)
LOC110500275 LOC106561664 coding downstream 122951 94686845 ~ 94701715 (+)
LOC118943818 NA coding downstream 144290 94708184 ~ 94710432 (+)
LOC110500292 LOC106561659 coding downstream 151259 94715153 ~ 94770734 (+)
G206859 NA non-coding upstream 34944 94527436 ~ 94528029 (+)
G206858 NA non-coding upstream 35895 94526572 ~ 94527078 (+)
G206844 NA non-coding upstream 58334 94504437 ~ 94504639 (+)
G206556 NA non-coding upstream 72819 94488578 ~ 94490154 (+)
G206896 NA non-coding downstream 49219 94613113 ~ 94613397 (+)
G206899 LOC100194703 non-coding downstream 52847 94616741 ~ 94617003 (+)
G206902 NA non-coding downstream 61263 94625157 ~ 94625377 (+)
G206909 NA non-coding downstream 68669 94632563 ~ 94632762 (+)
G206910 NA non-coding downstream 70302 94634196 ~ 94634546 (+)
G206850 NA other upstream 749 94557169 ~ 94562224 (+)
LOC110500139 LOC106561672 other upstream 125291 94391364 ~ 94437682 (+)
G206389 LOC106561642 other upstream 461101 94100979 ~ 94101872 (+)
G206285 NA other upstream 621502 93940486 ~ 93941471 (+)
G205688 NA other upstream 750804 93810360 ~ 93812169 (+)
G206908 NA other downstream 67935 94631829 ~ 94632267 (+)
G206926 NA other downstream 142052 94705946 ~ 94706248 (+)
G208404 NA other downstream 1663899 96227793 ~ 96228463 (+)
G208836 NA other downstream 2048535 96612429 ~ 96613459 (+)
G209586 NA other downstream 2922582 97486476 ~ 97486772 (+)

Expression


Co-expression Network