G207269 (LOC106561663)


Basic Information

Item Value
gene id G207269
gene name LOC106561663
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 94652121 ~ 94652897 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU234604
TAGGGCTCTAATAACTGTTTTATCCTTAGGGTCGTTGGTAAACTTGCTGTCTGAATTAAAGTTATAGTTTTCCTTCCACAGCCTTGTCACTTGAACTGAGCCATCTTTTTCAATGAACCGCCGGAAGCGATGGAACTTCTGCCTGCACCTGATTCCTCTGCTCAGGGATTCCCGAGCCAATCCCGGTTCCTTCCCGTTCTGGTCCTTCTGCTGATACAGGAAGGCCTGTAGTGTTTGAGTTCCGTCAGCAAAGATATCCTTGCGATGCTGCTGAAGTCCCTCCGAAATGGGGACTTGAACGATTGAACCTGACAAACCCAATAGTAGAGAGGATGGCGGCAGTGAGTATGAATGCTCTTGTGAGACTAACACAACCCGCTCCCCACTCCCCACCACCAGCCCCTTGGGTGACGGAGACTGAGGGGGGAGTTTAAGCCTAGCAGCAGAAGGGTGCTTCAGCAGAGCAGGAAGGACAAACTCTGGCTCACCATCTGGATCATGAGGAGAGATGCCATCTTTGACACTGTTGTCACTTATCACCAAACTTGGGTGGTCATCTTGTTTCTCAAGAGCCTTTGGGTCTGACTGTTGTTCCAGTACCTTGTCATTACTGGTACTGCGAGCCAAATCGGCCAATAGGGTCAGAGACTCTGCAGGTGGGCACGATACAGCGCTGGCACCTTCGCAGGGCCTACCCCTACTGACAACACGGCTGACATCCGGGTCAAGTGTCACTAGTTGGGAGGATATAGCTACTGTCTCCCTTTCTAAAGCAGC

Function

NR:

description
uncharacterized protein LOC110500246 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU234604 True 777 lncRNA 0.51 1 94652121 94652897

Neighbor

gene id symbol gene type direction distance location
asb13b LOC106561665 coding downstream 40329 94604044 ~ 94611792 (-)
LOC110500221 LOC106561669 coding downstream 122513 94526548 ~ 94529608 (-)
LOC110500153 LOC106561673 coding downstream 235113 94412244 ~ 94417008 (-)
LOC110500132 LOC106561675 coding downstream 284927 94364015 ~ 94367194 (-)
LOC110500125 LOC106561674 coding downstream 292199 94348518 ~ 94359922 (-)
LOC110500283 gdi2 coding upstream 13031 94665928 ~ 94686821 (-)
LOC110500320 LOC106604557 coding upstream 124661 94777558 ~ 94781368 (-)
LOC110500345 LOC106561680 coding upstream 307021 94959918 ~ 94974913 (-)
trnay-gua NA coding upstream 356705 95009602 ~ 95009691 (-)
LOC110500368 LOC105021811 coding upstream 362778 95015675 ~ 95020429 (-)
G207266 NA non-coding downstream 739 94648358 ~ 94651382 (-)
G207262 NA non-coding downstream 6303 94645354 ~ 94645818 (-)
G207261 NA non-coding downstream 7041 94644769 ~ 94645080 (-)
G207258 NA non-coding downstream 12581 94637144 ~ 94639540 (-)
G207255 NA non-coding downstream 16395 94635405 ~ 94635726 (-)
G207275 NA non-coding upstream 14261 94667158 ~ 94678848 (-)
G207305 NA non-coding upstream 52934 94705831 ~ 94706046 (-)
G207308 NA non-coding upstream 58117 94711014 ~ 94711213 (-)
G207309 NA non-coding upstream 58371 94711268 ~ 94711523 (-)
G207311 NA non-coding upstream 59711 94712608 ~ 94712890 (-)
G207249 NA other downstream 22382 94629437 ~ 94629739 (-)
G207244 LOC100194703 other downstream 34889 94616915 ~ 94617232 (-)
G206750 NA other downstream 323938 94327910 ~ 94328183 (-)
G206744 LOC106561643 other downstream 338203 94313390 ~ 94313918 (-)
G206742 LOC106561643 other downstream 339347 94312424 ~ 94312774 (-)
G207340 LOC105021815 other upstream 109765 94762662 ~ 94776356 (-)
G207858 LOC106561692 other upstream 724826 95377723 ~ 95408714 (-)
G207959 NA other upstream 871071 95523968 ~ 95524227 (-)
G207884 NA other upstream 951331 95604228 ~ 95609786 (-)
G207876 LOC106561706 other upstream 1029140 95680851 ~ 95686864 (-)

Expression


Co-expression Network