G207421


Basic Information

Item Value
gene id G207421
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 94920075 ~ 94921025 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU234786
cctcACCGCTGTCCTTGATGCCGTTCTCCTCTATAGTCTTCTGTTCAGCCAGTTCAGACAGAGACTCATCGATGGTCTGACTCCCTCTCAGAGTCTGGGACAGCCTCCTCCTAAACCGCTTCATCTTCTCCATGGTGCTCTTTGGCAGGGGAGGTCtggggagagaaggggacagtCAGTAAGgtctggggagaggaggggacagtcaGTAAggtctggggagaggaggggacagtcaGTAAGgtctggggagaggaggggagagtcaGTATGgtctggggagaggaggggagagtcaGTAAGGTCTGGGGAGAGTCAGTAAGGTCTGGGGAGAGTCAGTAAGGTCTGGGGAGAGTCAGTAAGGTCTGGGGAGAGTCAGTAAGGTCTGGGGAGAGTCAGTAAGGTCTGGGGAGAGTCAGTAAGGTCTGGGGAGAGTCAGTAAcgtctggggagaggagaggaggggacagtcaGTAAggtctggggagaggagaggaggggacagtcaGTAAGGtctagggagaggagaggaggggacagtcaGTAAggtctggggagaggagaggaggggacagtcaGTAAggtctggggagaggagaggaggggacagtcaGTAAggtctggggagaggagaggaggggacagtcaGTAAGgtctggggagaggagaggaggggacagtcaGTAAGGTCTGGGGAGAGTCAGTAAGGTCTGGGTATTAGtaaggatattttgtcaggaaaatatgctagaatatgcatataattgacagctttggatagaaaac
>TU234788
cctcACCGCTGTCCTTGATGCCGTTCTCCTCTATAGTCTTCTGTTCAGCCAGTTCAGACAGAGACTCATCGATGGTCTGACTCCCTCTCAGAGTCTGGGACAGCCTCCTCCTAAACCGCTTCATCTTCTCCATGGTGCTCTTTGGCAGGGGAGGTCtggggagagaaggggacagtCAGTAAGgtctggggagaggaggggacagtcaGTAAgGTCTGGGGAGAGTCAGTAAGGTCTGGGTATTAGtaaggatattttgtcaggaaaatatgctagaatatgcatataattgacagctttggatagaaaac
>TU234789
cctcACCGCTGTCCTTGATGCCGTTCTCCTCTATAGTCTTCTGTTCAGCCAGTTCAGACAGAGACTCATCGATGGTCTGACTCCCTCTCAGAGTCTGGGACAGCCTCCTCCTAAACCGCTTCATCTTCTCCATGGTGCTCTTTGGCAGGGGAGGTCtggggagagaaggggacagtCAGTAAGgtctggggagaggaggggacagtcaGTAAgttctggggagaggagaggaggggacagttAGTAAgttctggggagaggagaggaggggacagtcaGTAAgttctggggagaggagaggaggggacagtcaGTAAGGTCTGGGGAGGGGAGAGTCAGTGAGgtctggggagaggaggggacagtcaGTAAGgtctggggagaggaggggagagtcaGTATGgtctggggagaggaggggagagtcaGTAAGGTCTGGGGAGAGTCAGTAAGGTCTGGGGAGAGTCAGTAAGGTCTGGGGAGAGTCAGTAAGGTCTGGGGAGAGTCAGTAAGGTCTGGGGAGAGTCAGTAAGGTCTGGGGAGAGTCAGTAAGgtctggggagaggagaggaggggacagtcaGTAAggtctggggagaggagaggaggggacagtcaGTAAggtctggggagaggagaggaggggacagtcaGTAAGgtctggggagaggagaggaggggacagtcaGTAAGGTCTGGGGAGAGTCAGTAAGGTCTGGGTATTAGtaaggatattttgtcaggaaaatatgctagaatatgcatataattgacagctttggatagaaaac

Function

NR:

description
cyclin-dependent kinase 17-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU234786 False 786 lncRNA 0.55 3 94920075 94921025
TU234788 False 311 lncRNA 0.50 2 94920075 94921025
TU234789 True 791 lncRNA 0.55 3 94920075 94921025

Neighbor

gene id symbol gene type direction distance location
LOC110500320 LOC106604557 coding downstream 138707 94777558 ~ 94781368 (-)
LOC110500283 gdi2 coding downstream 233254 94665928 ~ 94686821 (-)
asb13b LOC106561665 coding downstream 308283 94604044 ~ 94611792 (-)
LOC110500221 LOC106561669 coding downstream 390467 94526548 ~ 94529608 (-)
LOC110500153 LOC106561673 coding downstream 503067 94412244 ~ 94417008 (-)
LOC110500345 LOC106561680 coding upstream 38893 94959918 ~ 94974913 (-)
trnay-gua NA coding upstream 88577 95009602 ~ 95009691 (-)
LOC110500368 LOC105021811 coding upstream 94650 95015675 ~ 95020429 (-)
LOC110502417 LOC106561684 coding upstream 176354 95097379 ~ 95124547 (-)
LOC118944198 NA coding upstream 350068 95271093 ~ 95271272 (-)
G207287 NA non-coding downstream 53720 94863530 ~ 94866355 (-)
G207392 NA non-coding downstream 64706 94854648 ~ 94855369 (-)
G207373 NA non-coding downstream 95849 94823436 ~ 94824226 (-)
G207358 NA non-coding downstream 107092 94812480 ~ 94812983 (-)
G207340 LOC105021815 non-coding downstream 155801 94762662 ~ 94776356 (-)
G207454 NA non-coding upstream 86955 95007980 ~ 95008186 (-)
G207283 NA non-coding upstream 92911 95013936 ~ 95015257 (-)
G207462 NA non-coding upstream 99466 95020491 ~ 95020717 (-)
G207471 NA non-coding upstream 128859 95049884 ~ 95050507 (-)
G207487 NA non-coding upstream 160017 95081042 ~ 95081243 (-)
G207249 NA other downstream 290336 94629437 ~ 94629739 (-)
G207244 LOC100194703 other downstream 302843 94616915 ~ 94617232 (-)
G206750 NA other downstream 591892 94327910 ~ 94328183 (-)
G206744 LOC106561643 other downstream 606157 94313390 ~ 94313918 (-)
G207858 LOC106561692 other upstream 456698 95377723 ~ 95408714 (-)
G207959 NA other upstream 602943 95523968 ~ 95524227 (-)
G207884 NA other upstream 683203 95604228 ~ 95609786 (-)
G207876 LOC106561706 other upstream 761012 95680851 ~ 95686864 (-)
G208077 NA other upstream 908349 95829374 ~ 95832362 (-)

Expression


Co-expression Network