G207517


Basic Information

Item Value
gene id G207517
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 95141941 ~ 95142815 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU234890
ctctcagctcattgctcttgtgtacagtcgttataaaaactctcagctcattgctcttgtgtacagtcgttataaaaactctcagctcattgcAATTCAAGTTTTTATTACGTGTTGAAAGGAAACTAAACGTTATAAAACAAAACTGCCGTCTTGAATCAACTACAGAAAAGCTAAGTGGAAAATCATGTCAGTTCGTATTGGGAGTAAACTAAGCCATTTAAAGATGGTAAAGTTTGAAACAAGAACAACTCCCCTCAGATGGACAAAGAGTTTCAAAGTTGTTTTTGCTAAGCATCCAACTTGCTGTTTGCATGTATGCAAATGGGTTTTAATTAGTCTGCCGTGTTGTCAGGTATCATAATATGAATTGTAGCGTTCTACCTTTTCAGTGGCATGTTGAAAGAGTCATACAGCAGTTGAGCATCACAACTTATTTATACTCCTCTGTACAGAATATCATTGATTGGTTGGTTTGACTTGATTATGTACACCTGGGGTATGTTCAGGAGAATGGACATTTACAGAATGTTCCGATAGAATTGTATTGTATCCGATGTATTGTGTAGATCAAATAGGACTATCAGATAGACTGGAATAGAATAGGAGTTTGTGTTtgctctattcattctatttctatctgcaacatgcAGTTCCTGCTTGCAGCCCTGCCTTTAGTTGAAGGCAGCCAATCCAATAATTTATGTTCCAGATACAACCCTCCCTTTAGTCGAAGGCAACCAATCCAATCGTTTCTGTTCCAGATACAACCCTCCCTTTAGTCGAAGGCAACCAATCCAATCGTTTCTGTTCCAGATACAACCCTCCCATTAGTTAAAATCTgtattcaaatatatatatatatatatatatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU234890 True 875 lncRNA 0.37 1 95141941 95142815

Neighbor

gene id symbol gene type direction distance location
LOC110502417 LOC106561684 coding downstream 17394 95097379 ~ 95124547 (-)
LOC110500368 LOC105021811 coding downstream 121512 95015675 ~ 95020429 (-)
trnay-gua NA coding downstream 132250 95009602 ~ 95009691 (-)
LOC110500345 LOC106561680 coding downstream 167028 94959918 ~ 94974913 (-)
LOC110500320 LOC106604557 coding downstream 360573 94777558 ~ 94781368 (-)
LOC118944198 NA coding upstream 128278 95271093 ~ 95271272 (-)
parietopsin LOC106561711 coding upstream 485634 95628449 ~ 95632062 (-)
LOC110502485 LOC106561707 coding upstream 493081 95635896 ~ 95664503 (-)
LOC110500466 nampt coding upstream 560544 95703359 ~ 95721115 (-)
LOC110533932 NA coding upstream 739316 95882131 ~ 95883679 (-)
G207503 NA non-coding downstream 21907 95119255 ~ 95120034 (-)
G207499 NA non-coding downstream 28427 95112765 ~ 95113514 (-)
G207278 NA non-coding downstream 46055 95095223 ~ 95095886 (-)
G207490 NA non-coding downstream 55760 95085888 ~ 95086181 (-)
G207487 NA non-coding downstream 60698 95081042 ~ 95081243 (-)
G207519 NA non-coding upstream 4675 95147490 ~ 95147876 (-)
G207524 NA non-coding upstream 11383 95154198 ~ 95200654 (-)
G207533 NA non-coding upstream 30473 95173288 ~ 95174426 (-)
G207575 NA non-coding upstream 97708 95240523 ~ 95240886 (-)
G207589 LOC106561689 non-coding upstream 116323 95259138 ~ 95261093 (-)
G207340 LOC105021815 other downstream 365585 94762662 ~ 94776356 (-)
G207249 NA other downstream 512202 94629437 ~ 94629739 (-)
G207244 LOC100194703 other downstream 524709 94616915 ~ 94617232 (-)
G206750 NA other downstream 813758 94327910 ~ 94328183 (-)
G206744 LOC106561643 other downstream 828023 94313390 ~ 94313918 (-)
G207858 LOC106561692 other upstream 234908 95377723 ~ 95408714 (-)
G207959 NA other upstream 381153 95523968 ~ 95524227 (-)
G207884 NA other upstream 461413 95604228 ~ 95609786 (-)
G207876 LOC106561706 other upstream 539222 95680851 ~ 95686864 (-)
G208077 NA other upstream 686559 95829374 ~ 95832362 (-)

Expression


Co-expression Network