G207115


Basic Information

Item Value
gene id G207115
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 95142348 ~ 95142704 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU234416
AATCAATGATATTCTGTACAGAGGAGTATAAATAAGTTGTGATGCTCAACTGCTGTATGACTCTTTCAACATGCCACTGAAAAGGTAGAACGCTACAATTCATATTATGATACCTGACAACACGGCAGACTAATTAAAACCCATTTGCATACATGCAAACAGCAAGTTGGATGCTTAGCAAAAACAACTTTGAAACTCTTTGTCCATCTGAGGGGAGTTGTTCTTGTTTCAAACTTTACCATCTTTAAATGGCTTAGTTTACTCCCAATACGAACTGACATGATTTTCCACTTAGCTTTTCTGTAGTTGATTCAAGACGGCAGTTTTGTTTTATAACGTTTAGTTTCCTTTCAACAC

Function

NR:

description
CCR4-NOT transcription complex subunit 1 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU234416 True 357 lncRNA 0.36 1 95142348 95142704

Neighbor

gene id symbol gene type direction distance location
LOC110502428 LOC106561683 coding upstream 1393 95124498 ~ 95140955 (+)
LOC110502411 LOC106561694 coding upstream 50042 95058364 ~ 95092306 (+)
LOC118943829 NA coding upstream 117903 95020413 ~ 95024445 (+)
LOC110500357 LOC106561695 coding upstream 128544 95007278 ~ 95013804 (+)
hal hal coding upstream 137190 94978217 ~ 95005158 (+)
LOC110502438 LOC106561685 coding downstream 6212 95148916 ~ 95177761 (+)
LOC110500385 LOC106561686 coding downstream 42192 95184896 ~ 95214670 (+)
LOC118944165 NA coding downstream 60733 95203437 ~ 95203568 (+)
LOC110500415 LOC106561689 coding downstream 78519 95221223 ~ 95261034 (+)
LOC110502458 LOC106561691 coding downstream 153917 95296621 ~ 95359874 (+)
G207106 NA non-coding upstream 33529 95108199 ~ 95108819 (+)
G207103 NA non-coding upstream 40969 95101098 ~ 95101379 (+)
G206887 NA non-coding upstream 46473 95095223 ~ 95095875 (+)
G207101 NA non-coding upstream 47523 95094391 ~ 95094825 (+)
G207099 NA non-coding upstream 56242 95085838 ~ 95086106 (+)
G207128 NA non-coding downstream 11989 95154693 ~ 95157417 (+)
G207146 NA non-coding downstream 61310 95204014 ~ 95204824 (+)
G207165 NA non-coding downstream 104936 95247640 ~ 95248106 (+)
G207643 NA non-coding downstream 202805 95345509 ~ 95345905 (+)
G206926 NA other upstream 436100 94705946 ~ 94706248 (+)
G206908 NA other upstream 510081 94631829 ~ 94632267 (+)
G206850 NA other upstream 580124 94557169 ~ 94562224 (+)
LOC110500139 LOC106561672 other upstream 704666 94391364 ~ 94437682 (+)
G206389 LOC106561642 other upstream 1040476 94100979 ~ 94101872 (+)
G208404 NA other downstream 1085089 96227793 ~ 96228463 (+)
G208836 NA other downstream 1469725 96612429 ~ 96613459 (+)
G209586 NA other downstream 2343772 97486476 ~ 97486772 (+)
G209591 NA other downstream 2475913 97618617 ~ 97619089 (+)
LOC110500822 LOC106561728 other downstream 2555407 97695939 ~ 97711108 (+)

Expression


Co-expression Network