G207858 (LOC106561692)



Basic Information


Item Value
gene id G207858
gene name LOC106561692
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 95377723 ~ 95408714 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU235317
CTTGGTACTCCTgccactcctctctccagcccagtGCCTCCGGCCCGGACCTTGTGGGACCCTCCTTCTCCCATGGGCCCAACAGTGAACTGGAAGGGACTTCCGGGGACATGCTGCCCGCTGTACTTCACGTTGACCGTGTGTGCCCCCATCTCCTGGGGTACGAAGCGGACGCTGTAGGTGCTATCCCCTCCATCTACGATCTCTGCCTGTTCTGTTTTACCCCCGGGGCTGGTCACCTGGGCTGTCATACTACCCTGGGTAACTGTCTCACctgggggagagtggagggaggaggggagggggggagagagagaagagagaaaggaggagagagaaaggaggagagagggaaagaagcagagagaagagagaaaggaggagagagaaaggaggagagggagaagagagaaaggaggagagagaggggaggagagagagaagagagaaaggaggagagagaggagaggagagagagaagagagaaaggaggagagagaaaggaggagagaaaggaggagagagagaaaggaggagagggataagagagaaaggaggagagagaggggaggagagagaaaagagagaaagcaggagagagaaagaaggagagagaagagggaaatcaggagagagaaaggaggagagagaggggaggagagagagaagagcgaaatgaggagagagaaaggaggagagagaggagagtgctgACTCACTTGGTCCAGTCACGGAGACTTTGAGCTCTCCGCTGCCGGCTCCCTTGGTGAAGACCTTGAAGTCTGCCACCTCCTTCACCCTCACCCCCTTAGGCTGGAGGCCTCGGCCCGTGGCACGACACGCGTTGGCATTGAtggctggagagggagagagaggcgtggTTAAGGACAGTGGAACATAGACTGGCCTAACAGTATGGGACCTATTGATAGATTTGTAcattgtacattgttacaacactgtatatatacataatatgacatttgtaatgtctttattattttgacatttctgtatgtgtaatgtttactgttaatttttattgtttatttcattttgtatattatctacctcacttgctttggcaatgttaacgtttcccatgccaataaagcccctagAATTGAATttaatggatagatagatagattgatagatagatagatagatagacagacagacagacagacagacagacagacagagagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagatagatagatagatatacagatagatatacagatagatatacagatagatatacagacagatagacattCCCATACGGTATAACGCCATATGCAAACAAGATGCTGCAAAGAATGCCTTCTTGAAGGACACAGAACATCATCAGTCAATCAATTCCCATAGGATGCCAGCTATGAACACAATGCAGCAGAGGAGGACTAGCACAGTGCTGAATGTAGGAGGGTCACGCCGTATAATACACACTCATGTAATGGTCGCAGCATAAAAATATGAATGGCGATTCCAGGCATCATGATTGCGGGCTTGGCTATGCTCATTAGTTTGAAGCAATCAAACCTATGAATGCTAACCCAAGATCAAGGAATCACAGCAAGCGATAAAACATTTGACACTGCATTTTCGTAATACAATCTGTGAAGCACTGTCTCACAAAGACTGAAATAACTTTCCTGGATAGTTTCTGACTACAACGTTCACTTTGCTACAAATCGAGGGCTAGAAATATCAGTGTCCAACATCAAGCTGCCACAGGCGAGGCGGCAGGCGCCCAAGCAAGGCACTCAGATGGTATAGCATTGCCCCCGTCACAGGAAGCAAACAGGGCACCTGCAAGGCATAGGGCAAATGGCATAGAGTATAGTGCACAGGGACGCTGGGGCACGGCTAGCATATCAGCGGGCAAAACGGGCGCAGGCGTCCACCTGGAGGGCCCATACTAACTTGGTCGACCCTTTTTGCCTTTGGGGGTAGGGACACCCCCTTTCTTGCCCGCTGGCTCCTTCCCCCCCccgggagaggtgaaggaagaCTGGGGGATAATCTGGACTGGAGGAGGACCCACCATAGAGGGAGGAGCTACAAATCACAGACAGCATGTTCATTTAACTTTAACATAGTACACTAAACTGGTCTCGGTCGTCGTGACAACCTGTTAGTACCGCCGTGGGATCGAGATAGCTGTAGACTGTGGAACTAGAGAGTGACAGATCGACAACGGAACGACACAATTTTACAACAGTGATTTTTGTAGTGACAGTTGGTGATAGTTAGTGACAGTTGGTTAGCTCAGTGCTAACTCACCCTCTGCGATTTGAACTTTGAAGGGGCTCTTGGGGATCTCCTGACCCGCGAACAGGATGTGGATGGTGTGGGGGCCCTCCAACATGGGCCGGTAGGTGCAACGGAAAACACTGTCCCCTTTGTTTTCCAAAATCAGTTCCACTGTGTCTTTCTTCCCCTCAGGGTCCACGACGACAACGCTCACATCACCATTACCAGCACCTGTACAAGACAACAGGAAGACACCAATCAAAATGCTGTTGATCAACCATGTGATCAAAACAAGGAAACATGGACAAACCATGCGATCACAAGGAAACATGCATGGACATTGTTGTGGGCCCTCGGAGTAAATGCATAGCCGCAGGAAGTTGTTTGGGGGGGTATAAGAAATGTTGCCGGCGCTACAGATatcggtctgctaatacaggactagtaaaggccctgtACACTACAACAGAAATATGTCAATAATTCAGGGGTTGCTGTAGCATCCTCAGTAAATGTTTGGATTCCCCTCTAGTGTCTCCAGTTTTGTCCAGCAACTGATCTGATCAGTGTTACTGTGTTTCTTGTCCAACATTGTTGACTTCCCGCTCCTTACCTGCGGTGTAGATGTCGAAATAGGTGGGTTTGTTGGCCACGTTGCCGGTAGGTTCCAGCCCTGGTCCTCTGGCCTGGACCTTGTTGGGATCGCCCATGGCCTTGGCAACGTTCACTGTGTAGGGACTCTTGTCAATGTCCTGCCCTGCAAACAGCACTTTtacctgaggggggggggacgttcAAATGTTCCTGTGAGTTTCCAATGCTCTAGTGGTACATTGTGACAATGAGATGTGTAGATTGTAAAATAAAGACAAGTAAAGGCAAGTAAAAATAAGTAGAGTAATGTACAGTTTTACTAAAGTAACGTAAAGAATACATAACATAAATCTACACGGGACATTGATGGCAGCCGTTTGTTTACCTTGTGGACACCCTCAACCTTGGGTACATAAGTGACAGTGTAGGTCCTGTTTTTGTCATTGTTGAAGACCACCGTAGCCTCCTCAGTGTGTCCCTCGGGATCGGTCACATAGACCAGCACCTCGGCCTGACCTGCCTGCAGAGTCTCCACTGTGAACACTGCTGGCTTCAGAACCATGTTTCCGTGGGAATCAATACCTACGGGGAGGGAGTGGCAGATGGCGAGTTAGATATGTTTGAGTCTGTGTGTATAAAACAATAAATGATGCTTATCAGTTGCTTGGGTTGCAAATACCCCAGAAATATTCTAAAAGTGCCTGGCCGTTCATAACCCAAACGATGCCATGGTTCTGAAATCCTGGAGGGAAGTTTCCTTCCCTGCTTATTGCCTCCTGATTCCCGAGAATCATGCAACCGAGATTCCTCAGAAACATGGGGATTTTGAGAATGTTTCCGGGAATTTCTCAACCCAAGTCCTGATTCAACTACACTGTTCATGGTTTCTATCTCAGTGAGCACCCACCAGGTCCGTATGCCTTGGCCTTGTTGGGGTACAGCTGAACGCCTTTAGGTTTGAGGGGAGCGCCAGGCTTCAGCTTAGCCTTGGGGAACTGGGACAGGTAGGTCATCACTGAGTGTTCATCCACATCCGGATCGACAATCTCCTCAGGGGCGATCACCTAGGGGCACGCCCAGCCAGTCGTCAGCCTGCTGCATGGCCTCTCTGGCATTCTCCACGGGGTGGTTAGGGTCCCAGGCCTTCCAGTCACGGTGGAAGTTGTTGATGGGTAGCTCAGGCACCTTGTTCTGGATCCATCCCAGCAGCCTCTGCTTGGGGGTCAGTTTCTTagcctcctcatcatcctcatcctcccACATGGGCATGGAGATGGAGTAGTGCAGGATCAGAGTCCAGATCAGACCTAGGATCAGTTTCAGATTACCGTCCACGATGGCCTTGGAG

Function


NR:

description
PREDICTED: filamin-C-like isoform X3

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU235317 True 4315 TUCP 0.37 5 95377723 95408714

Neighbor


gene id symbol gene type direction distance location
LOC118944198 NA coding downstream 106451 95271093 ~ 95271272 (-)
LOC110502417 LOC106561684 coding downstream 253176 95097379 ~ 95124547 (-)
LOC110500368 LOC105021811 coding downstream 357294 95015675 ~ 95020429 (-)
trnay-gua NA coding downstream 368032 95009602 ~ 95009691 (-)
LOC110500345 LOC106561680 coding downstream 402810 94959918 ~ 94974913 (-)
parietopsin LOC106561711 coding upstream 219735 95628449 ~ 95632062 (-)
LOC110502485 LOC106561707 coding upstream 227182 95635896 ~ 95664503 (-)
LOC110500466 nampt coding upstream 294645 95703359 ~ 95721115 (-)
LOC110533932 NA coding upstream 473417 95882131 ~ 95883679 (-)
LOC110502500 LOC106561698 coding upstream 642588 96051302 ~ 96092405 (-)
G207875 NA non-coding downstream 15097 95362260 ~ 95362626 (-)
G207867 NA non-coding downstream 17864 95356208 ~ 95359859 (-)
G207869 LOC106561691 non-coding downstream 30179 95335262 ~ 95347544 (-)
G207836 NA non-coding downstream 80764 95296574 ~ 95296959 (-)
G207593 NA non-coding downstream 98536 95268306 ~ 95279187 (-)
G207916 NA non-coding upstream 27345 95436059 ~ 95436584 (-)
G207917 NA non-coding upstream 29945 95438659 ~ 95446469 (-)
G207934 NA non-coding upstream 73768 95482482 ~ 95482771 (-)
G207943 LOC106561696 non-coding upstream 74385 95483099 ~ 95484439 (-)
G207944 NA non-coding upstream 76833 95485547 ~ 95485895 (-)
G207340 LOC105021815 other downstream 601367 94762662 ~ 94776356 (-)
G207249 NA other downstream 747984 94629437 ~ 94629739 (-)
G207244 LOC100194703 other downstream 760491 94616915 ~ 94617232 (-)
G206750 NA other downstream 1049540 94327910 ~ 94328183 (-)
G206744 LOC106561643 other downstream 1063805 94313390 ~ 94313918 (-)
G207959 NA other upstream 115254 95523968 ~ 95524227 (-)
G207884 NA other upstream 195514 95604228 ~ 95609786 (-)
G207876 LOC106561706 other upstream 273323 95680851 ~ 95686864 (-)
G208077 NA other upstream 420660 95829374 ~ 95832362 (-)
G208472 NA other upstream 725363 96134077 ~ 96134472 (-)

Expression



Co-expression Network