G207798


Basic Information

Item Value
gene id G207798
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 95706454 ~ 95720856 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU235230
AGGACAGTATCTAATGGGTCTCCTGAGTCTGGCCTGATGACCAAGGGTGCGTCAGCGCTGCGGGACTCAATGAGGCTCCTGAGGTCCTCTCCCCATATCTTCTCACAGGCGTTGTAGATATCGTAGCTGTCGCTGACGATGGACACGGGCACGTTGGGGAACTGCCTCACAATGTGCTCAAAGGCATCTTTCTCGTGGTCCTTACCCCAGGCGGTGATGGTGctGTGCTCTGCGGCTGGCACAGAGAAGCCGGGCACAGGGTCTTTGGTGCCGTAGTACTTCTTAATGACACAGATACCAGCTACCGTGTCTGTGCCTTTAAAGTTCACCAGGTGGGCAGATGCTCCGATGCCAGCAGTCTCTTGAGATGAGACTCCCCTGTAGCCAAAGTCATGCAGCTTATACTCCAGTTTGTCCTGGTTCCCTGATGTCTCCAGTAGATACCTGGCTAGGATCTTCTTCTGCTCTCTGGAGTTAGTAGCTACTGTGATGGGGTACCAGATCTGCACCAGGATTGTCTCTACCCAGTTGGTGAGCCAGTAGCATTCTGGGTCAGTACTCTCCACGGTGAAGAGGACATTACCTCTGGGGATCACACTACCCTCGGGAACAGCCTTGATTTCAATGGGCAGGTGGCCGTCATACTTCTCCAGTATGTACTCCCAGCCCTTTTCGTTGAACACATCATCCTGAAAGTGTTCACGGTAAACTTCCTTTGCTTCTGTGATCTTCTGTGGAGTCACCACTTTCCCTTTCAGATACTTATGAAGGATATACTGAAGTCcataaaatacagttttatcaTATTTCACTTTCTGAATCTTAGTGGATTCAGTTTTCTTTGCCCGACACTCAAAGTAGGAGTAAACCTTGGTGGTGTTGGGAGGGTACTGCTTGTAATGTGTGACCTTGTATGAATCGGTAGCCAGCAGGAAATTGAAGTCTCCGTGCTCCATGTTCCCCTC

Function

NR:

description
nicotinamide phosphoribosyltransferase-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU235230 True 965 lncRNA 0.44 7 95706454 95720856

Neighbor

gene id symbol gene type direction distance location
LOC110502494 cdhr3 coding upstream 7714 95688561 ~ 95698740 (+)
grp94 LOC106561706 coding upstream 19599 95678926 ~ 95686855 (+)
LOC110502472 LOC105029723 coding upstream 100629 95482323 ~ 95605825 (+)
LOC110502465 LOC106561692 coding upstream 289590 95372098 ~ 95416864 (+)
LOC110502458 LOC106561691 coding upstream 346580 95296621 ~ 95359874 (+)
LOC110500475 prkar2b coding downstream 11001 95731857 ~ 95747216 (+)
LOC110500485 hbp1 coding downstream 30023 95750879 ~ 95763143 (+)
LOC118936882 NA coding downstream 164731 95885587 ~ 95888114 (+)
LOC110500522 gpr22 coding downstream 272350 95993206 ~ 96011204 (+)
LOC110500533 LOC106561700 coding downstream 313364 96034220 ~ 96043570 (+)
G207797 NA non-coding upstream 2718 95699282 ~ 95703736 (+)
G207749 NA non-coding upstream 42583 95662647 ~ 95663871 (+)
G207786 NA non-coding upstream 44151 95661016 ~ 95662303 (+)
G207696 NA non-coding upstream 73055 95632209 ~ 95633399 (+)
G207770 NA non-coding upstream 81448 95624201 ~ 95625006 (+)
G207806 NA non-coding downstream 2769 95723625 ~ 95723889 (+)
G207818 NA non-coding downstream 43436 95764292 ~ 95764518 (+)
G207821 NA non-coding downstream 48443 95769299 ~ 95769552 (+)
G207822 NA non-coding downstream 56326 95777182 ~ 95810614 (+)
G207825 NA non-coding downstream 79852 95800708 ~ 95809969 (+)
G206926 NA other upstream 1000206 94705946 ~ 94706248 (+)
G206908 NA other upstream 1074187 94631829 ~ 94632267 (+)
G206850 NA other upstream 1144230 94557169 ~ 94562224 (+)
LOC110500139 LOC106561672 other upstream 1268772 94391364 ~ 94437682 (+)
G206389 LOC106561642 other upstream 1604582 94100979 ~ 94101872 (+)
G208404 NA other downstream 506937 96227793 ~ 96228463 (+)
G208836 NA other downstream 891573 96612429 ~ 96613459 (+)
G209586 NA other downstream 1765620 97486476 ~ 97486772 (+)
G209591 NA other downstream 1897761 97618617 ~ 97619089 (+)
LOC110500822 LOC106561728 other downstream 1977255 97695939 ~ 97711108 (+)

Expression


Co-expression Network