G208089


Basic Information

Item Value
gene id G208089
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 95843190 ~ 95843614 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU235592
ggtgtttcctccggcgcattggtgcggctggcttccgggttggatgtgcgctgtgttaaagaagcagcggcttggttgggttgtgtatcggaggacgcatgactttcaaccttcgtctctcccgagcccgtacgggagttgtagcgatgagacaagatagtagctactacaacaattggatactacgaaattggggagaaaaaggggtaaaaaaaaaaagaaagtaaaggggctgaataattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235592 True 243 lncRNA 0.49 2 95843190 95843614

Neighbor

gene id symbol gene type direction distance location
LOC110500485 hbp1 coding upstream 80047 95750879 ~ 95763143 (+)
LOC110500475 prkar2b coding upstream 95974 95731857 ~ 95747216 (+)
LOC110502494 cdhr3 coding upstream 144450 95688561 ~ 95698740 (+)
grp94 LOC106561706 coding upstream 156335 95678926 ~ 95686855 (+)
LOC110502472 LOC105029723 coding upstream 237365 95482323 ~ 95605825 (+)
LOC118936882 NA coding downstream 41973 95885587 ~ 95888114 (+)
LOC110500522 gpr22 coding downstream 149592 95993206 ~ 96011204 (+)
LOC110500533 LOC106561700 coding downstream 190606 96034220 ~ 96043570 (+)
LOC110500557 LOC106561743 coding downstream 1127777 96971391 ~ 97028188 (+)
LOC110500585 LOC106561739 coding downstream 1238321 97081935 ~ 97085041 (+)
G208083 NA non-coding upstream 4463 95838514 ~ 95838727 (+)
G208076 NA non-coding upstream 14414 95828521 ~ 95828776 (+)
G207835 NA non-coding upstream 16541 95826421 ~ 95826649 (+)
G207823 NA non-coding upstream 17248 95804055 ~ 95825942 (+)
G207825 NA non-coding upstream 33221 95800708 ~ 95809969 (+)
G208093 NA non-coding downstream 2274 95845888 ~ 95846123 (+)
G208117 NA non-coding downstream 20244 95863858 ~ 95957698 (+)
G208224 NA non-coding downstream 128886 95972500 ~ 95972728 (+)
G208227 NA non-coding downstream 130014 95973628 ~ 95973852 (+)
G208232 NA non-coding downstream 135542 95979156 ~ 95979483 (+)
G206926 NA other upstream 1136942 94705946 ~ 94706248 (+)
G206908 NA other upstream 1210923 94631829 ~ 94632267 (+)
G206850 NA other upstream 1280966 94557169 ~ 94562224 (+)
LOC110500139 LOC106561672 other upstream 1405508 94391364 ~ 94437682 (+)
G206389 LOC106561642 other upstream 1741318 94100979 ~ 94101872 (+)
G208404 NA other downstream 384179 96227793 ~ 96228463 (+)
G208836 NA other downstream 768815 96612429 ~ 96613459 (+)
G209586 NA other downstream 1642862 97486476 ~ 97486772 (+)
G209591 NA other downstream 1775003 97618617 ~ 97619089 (+)
LOC110500822 LOC106561728 other downstream 1854497 97695939 ~ 97711108 (+)

Expression


Co-expression Network